Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30395
(436 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 22 2.9
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 22 2.9
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 2.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 2.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 2.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 2.9
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 22 2.9
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 21 6.7
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 6.7
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 21 6.7
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 21 6.7
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 21 6.7
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 21.8 bits (44), Expect = 2.9
Identities = 11/37 (29%), Positives = 12/37 (32%)
Frame = +2
Query: 26 HDRIIRPEETLTHTRYSICRLAQSTEHLTRHFIIAEN 136
H R R TH R EH R F+ N
Sbjct: 16 HKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVAN 52
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 21.8 bits (44), Expect = 2.9
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 321 APVLPRSTATPFEWXNSYTTQSTLRPHVSRRVATFK 428
A V+P + TP E YT H R+A F+
Sbjct: 166 ATVVPEGSRTPIEIPRDYTASDLEEEH---RLAYFR 198
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 2.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 50 ETLT-HTRYSICRLAQSTEHLTRHFIIAENPKNNK 151
ET++ HT S + ++++H+TR + A NK
Sbjct: 540 ETISNHTDASSAKAVKNSDHITRIYACATMWHENK 574
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 2.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 50 ETLT-HTRYSICRLAQSTEHLTRHFIIAENPKNNK 151
ET++ HT S + ++++H+TR + A NK
Sbjct: 540 ETISNHTDASSAKAVKNSDHITRIYACATMWHENK 574
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 2.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 50 ETLT-HTRYSICRLAQSTEHLTRHFIIAENPKNNK 151
ET++ HT S + ++++H+TR + A NK
Sbjct: 540 ETISNHTDASSAKAVKNSDHITRIYACATMWHENK 574
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 2.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 50 ETLT-HTRYSICRLAQSTEHLTRHFIIAENPKNNK 151
ET++ HT S + ++++H+TR + A NK
Sbjct: 540 ETISNHTDASSAKAVKNSDHITRIYACATMWHENK 574
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 21.8 bits (44), Expect = 2.9
Identities = 11/37 (29%), Positives = 12/37 (32%)
Frame = +2
Query: 26 HDRIIRPEETLTHTRYSICRLAQSTEHLTRHFIIAEN 136
H R R TH R EH R F+ N
Sbjct: 169 HKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVAN 205
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 20.6 bits (41), Expect = 6.7
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2
Query: 372 SCSTIQTGSRY 340
SCS IQTG ++
Sbjct: 383 SCSNIQTGEQF 393
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 20.6 bits (41), Expect = 6.7
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -2
Query: 372 SCSTIQTGSRY 340
SCS IQTG ++
Sbjct: 390 SCSNIQTGEQF 400
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 20.6 bits (41), Expect = 6.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 388 HSDLMSQGEWRHSSRA 435
H LMS+GE R S +A
Sbjct: 94 HEALMSRGERRFSHKA 109
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 20.6 bits (41), Expect = 6.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 388 HSDLMSQGEWRHSSRA 435
H LMS+GE R S +A
Sbjct: 254 HEALMSRGERRFSHKA 269
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 20.6 bits (41), Expect = 6.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 388 HSDLMSQGEWRHSSRA 435
H LMS+GE R S +A
Sbjct: 254 HEALMSRGERRFSHKA 269
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,832
Number of Sequences: 336
Number of extensions: 2178
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 9670396
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -