Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30394
         (459 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   2.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   3.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   3.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   4.8  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   8.5  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
 Frame = -2

Query: 257 SGIASRPSSQTFRA---RCVQPPRCPRGR 180
           SG  S    +  RA   +  QPP+CPR R
Sbjct: 544 SGSTSSGDDELHRASLSKTPQPPQCPRFR 572


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 271 WLFLPQVSLLVQALRHSVLD 212
           +LFL  + LLVQA+ + V D
Sbjct: 9   FLFLASLCLLVQAVPNKVAD 28


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 271 WLFLPQVSLLVQALRHSVLD 212
           +LFL  + LLVQA+ + V D
Sbjct: 9   FLFLASLCLLVQAVPNKVAD 28


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +2

Query: 371 RVCEINEHGDAMCNCI 418
           +VC    H D+ C C+
Sbjct: 344 QVCRSRRHSDSCCLCL 359


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 354 PLQRRNVSAKSTNTET 401
           PL+RRN+   + N +T
Sbjct: 332 PLKRRNIEIVAKNNDT 347


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,015
Number of Sequences: 438
Number of extensions: 1951
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)