Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30393
(334 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62857 Cluster: 40S ribosomal protein S28; n=137; Eukar... 94 5e-19
UniRef50_Q10421 Cluster: 40S ribosomal protein S28; n=13; Eukary... 81 5e-15
UniRef50_UPI0000E1F4D9 Cluster: PREDICTED: similar to ribosomal ... 73 1e-12
UniRef50_Q9SR73 Cluster: 40S ribosomal protein S28-1; n=13; Magn... 73 1e-12
UniRef50_Q4WGB8 Cluster: Ribosomal protein S28e; n=9; Fungi/Meta... 61 6e-09
UniRef50_Q57U30 Cluster: 40S ribosomal protein S33, putative; n=... 59 2e-08
UniRef50_Q5EMS8 Cluster: 40S ribosomal protein S28-like protein;... 58 3e-08
UniRef50_Q8TVE7 Cluster: 30S ribosomal protein S28e; n=11; cellu... 58 4e-08
UniRef50_P54065 Cluster: 30S ribosomal protein S28e; n=27; Archa... 56 2e-07
UniRef50_Q3LVV1 Cluster: Ribosomal protein S28; n=1; Bigelowiell... 54 8e-07
UniRef50_A2VEJ7 Cluster: IP17744p; n=1; Drosophila melanogaster|... 51 6e-06
UniRef50_Q980Q5 Cluster: 30S ribosomal protein S28e; n=14; Archa... 50 1e-05
UniRef50_Q3V3R3 Cluster: 16 days neonate cerebellum cDNA, RIKEN ... 48 3e-05
UniRef50_Q8SQM2 Cluster: 40S RIBOSOMAL PROTEIN S28; n=1; Encepha... 48 3e-05
UniRef50_P57710 Cluster: 30S ribosomal protein S28e; n=9; Euryar... 47 7e-05
UniRef50_Q5THV0 Cluster: OTTHUMP00000028879; n=1; Homo sapiens|R... 43 0.002
UniRef50_UPI0000EC9EE1 Cluster: UPI0000EC9EE1 related cluster; n... 40 0.015
UniRef50_Q9IMU3 Cluster: VP1; n=5; Banna virus|Rep: VP1 - Banna ... 34 0.72
UniRef50_A0E074 Cluster: Chromosome undetermined scaffold_71, wh... 34 0.72
UniRef50_Q9WVB3 Cluster: Transducin-like enhancer protein 6; n=5... 33 1.7
UniRef50_UPI0000DB6B2B Cluster: PREDICTED: similar to CG8561-PA;... 32 2.2
UniRef50_Q924E0 Cluster: BRCA1; n=38; Eutheria|Rep: BRCA1 - Pede... 32 2.2
UniRef50_Q55BQ3 Cluster: SCY1 family protein kinase; n=1; Dictyo... 32 2.9
UniRef50_UPI0000E48E73 Cluster: PREDICTED: hypothetical protein;... 31 3.9
UniRef50_O89232 Cluster: Immediate-early protein; n=2; Canid her... 31 3.9
UniRef50_Q7WA21 Cluster: Citrate lyase beta chain; n=3; Bordetel... 31 3.9
UniRef50_A6LGM6 Cluster: Putative outer membrane protein, probab... 31 3.9
UniRef50_Q21QM6 Cluster: Putative uncharacterized protein precur... 31 5.1
UniRef50_Q4QF64 Cluster: Protein kinase, putative; n=2; Leishman... 31 5.1
UniRef50_A7S7T2 Cluster: Predicted protein; n=2; Nematostella ve... 31 5.1
UniRef50_A4HNC0 Cluster: Putative uncharacterized protein; n=3; ... 31 5.1
UniRef50_P38398 Cluster: Breast cancer type 1 susceptibility pro... 31 5.1
UniRef50_A7J6F3 Cluster: Putative uncharacterized protein N099R;... 31 6.7
UniRef50_A3JPB4 Cluster: Phage integrase; n=3; Rhodobacterales b... 31 6.7
UniRef50_Q9LML0 Cluster: F10K1.11 protein; n=15; Magnoliophyta|R... 31 6.7
UniRef50_A7IXQ7 Cluster: Putative uncharacterized protein b732L;... 30 8.9
UniRef50_Q2GL28 Cluster: Flavin reductase family protein; n=6; A... 30 8.9
UniRef50_Q1JSI5 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
UniRef50_A7TAQ7 Cluster: Predicted protein; n=1; Nematostella ve... 30 8.9
>UniRef50_P62857 Cluster: 40S ribosomal protein S28; n=137;
Eukaryota|Rep: 40S ribosomal protein S28 - Homo sapiens
(Human)
Length = 69
Score = 94.3 bits (224), Expect = 5e-19
Identities = 44/55 (80%), Positives = 50/55 (90%)
Frame = +3
Query: 90 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILTLLES 254
+P LARV KVLGRTGSQGQCTQV+VEF+ +TSR IIRNVKGPVR+GD+LTLLES
Sbjct: 7 QPIKLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLTLLES 61
>UniRef50_Q10421 Cluster: 40S ribosomal protein S28; n=13;
Eukaryota|Rep: 40S ribosomal protein S28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 68
Score = 81.0 bits (191), Expect = 5e-15
Identities = 39/54 (72%), Positives = 46/54 (85%)
Frame = +3
Query: 93 PNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILTLLES 254
P LA+V+KVLGRTGS+G TQV+VEF+ +TSR IIRNVKGPVR+ DIL LLES
Sbjct: 7 PVKLAKVIKVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGPVREDDILVLLES 60
>UniRef50_UPI0000E1F4D9 Cluster: PREDICTED: similar to ribosomal
protein S28; n=2; Catarrhini|Rep: PREDICTED: similar to
ribosomal protein S28 - Pan troglodytes
Length = 356
Score = 73.3 bits (172), Expect = 1e-12
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +3
Query: 90 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPV 221
+P LARV KVLGRTGSQGQCTQV+V+F+ +TSR IIRNVKGPV
Sbjct: 7 QPIKLARVTKVLGRTGSQGQCTQVRVKFMDDTSRSIIRNVKGPV 50
>UniRef50_Q9SR73 Cluster: 40S ribosomal protein S28-1; n=13;
Magnoliophyta|Rep: 40S ribosomal protein S28-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 64
Score = 73.3 bits (172), Expect = 1e-12
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = +3
Query: 84 MDKPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILTLLES 254
MD A VVKV+GRTGS+GQ TQV+V+F ++ R I+RNVKGPVR+GDILTLLES
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFT-DSDRYIMRNVKGPVREGDILTLLES 56
>UniRef50_Q4WGB8 Cluster: Ribosomal protein S28e; n=9; Fungi/Metazoa
group|Rep: Ribosomal protein S28e - Aspergillus
fumigatus (Sartorya fumigata)
Length = 56
Score = 60.9 bits (141), Expect = 6e-09
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = +3
Query: 90 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGP 218
+P L +V +VLGRTGS+G TQV+VEF+ +TSR IIRNVKGP
Sbjct: 6 QPVKLVKVTRVLGRTGSRGGVTQVRVEFMDDTSRSIIRNVKGP 48
>UniRef50_Q57U30 Cluster: 40S ribosomal protein S33, putative; n=1;
Trypanosoma brucei|Rep: 40S ribosomal protein S33,
putative - Trypanosoma brucei
Length = 103
Score = 58.8 bits (136), Expect = 2e-08
Identities = 27/53 (50%), Positives = 40/53 (75%), Gaps = 5/53 (9%)
Frame = +3
Query: 111 VVKVLGRTGSQGQCTQVKVEFIGE-----TSRQIIRNVKGPVRDGDILTLLES 254
++KVLGRTGS+G TQV+V + E +R I+RNVKGP ++GD+L+L+E+
Sbjct: 43 IIKVLGRTGSRGNVTQVRVRLMAEEGSPEANRTIVRNVKGPCKEGDMLSLMET 95
>UniRef50_Q5EMS8 Cluster: 40S ribosomal protein S28-like protein;
n=2; Sordariomycetes|Rep: 40S ribosomal protein S28-like
protein - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 85
Score = 58.4 bits (135), Expect = 3e-08
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +3
Query: 90 KPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGP 218
+P L +V +VLGRTGS+G TQV+VEF+ + SR IIRNVKGP
Sbjct: 6 QPVKLVKVTRVLGRTGSRGGVTQVRVEFMDDQSRSIIRNVKGP 48
>UniRef50_Q8TVE7 Cluster: 30S ribosomal protein S28e; n=11; cellular
organisms|Rep: 30S ribosomal protein S28e - Methanopyrus
kandleri
Length = 74
Score = 58.0 bits (134), Expect = 4e-08
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Frame = +3
Query: 105 ARVVKVLGRTGSQGQCTQVKVEFIG--ETSRQIIRNVKGPVRDGDILTLLES 254
A VV++LGRTG G+ TQVKV + + R I RNVKGPVR+GDIL L E+
Sbjct: 15 AEVVEILGRTGMAGEVTQVKVRILEGPDKGRIITRNVKGPVREGDILLLRET 66
>UniRef50_P54065 Cluster: 30S ribosomal protein S28e; n=27;
Archaea|Rep: 30S ribosomal protein S28e - Methanococcus
jannaschii
Length = 75
Score = 56.0 bits (129), Expect = 2e-07
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +3
Query: 90 KPNVLARVVKVLGRTGSQGQCTQVKVEFIG--ETSRQIIRNVKGPVRDGDILTLLESNVK 263
K V A V++V+GRTG G QV+ + +G +T R ++RNVKGPV+ GDI+ L E+ +
Sbjct: 8 KEAVAAEVIEVIGRTGVTGGIIQVRCKILGGKDTGRVLVRNVKGPVKVGDIIMLRETERE 67
Query: 264 LGGCDR 281
DR
Sbjct: 68 ARPLDR 73
>UniRef50_Q3LVV1 Cluster: Ribosomal protein S28; n=1; Bigelowiella
natans|Rep: Ribosomal protein S28 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 65
Score = 53.6 bits (123), Expect = 8e-07
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +3
Query: 111 VVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILTLLES 254
V K+L + G +GQ TQV+V+ I + +IRN+KGPVR GDI+ L ES
Sbjct: 13 VTKILKKVGKRGQGTQVRVKSITNIKKTLIRNIKGPVRIGDIVLLKES 60
>UniRef50_A2VEJ7 Cluster: IP17744p; n=1; Drosophila
melanogaster|Rep: IP17744p - Drosophila melanogaster
(Fruit fly)
Length = 73
Score = 50.8 bits (116), Expect = 6e-06
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +3
Query: 105 ARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDI 236
ARV+K+L R G++G T+V+V+ + + Q +R VKGPVR GD+
Sbjct: 7 ARVIKILNRIGARGILTEVRVQLVDQPKMQFMRTVKGPVRLGDV 50
>UniRef50_Q980Q5 Cluster: 30S ribosomal protein S28e; n=14;
Archaea|Rep: 30S ribosomal protein S28e - Sulfolobus
solfataricus
Length = 83
Score = 50.0 bits (114), Expect = 1e-05
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = +3
Query: 105 ARVVKVLGRTGSQGQCTQVKVEFIG--ETSRQIIRNVKGPVRDGDILTLLES 254
A V+++L RTG G+ TQV+V + + R + RNVKGPVR GDIL L E+
Sbjct: 21 AEVIQILDRTGVTGEVTQVRVRVLEGRDKGRILTRNVKGPVRVGDILILRET 72
>UniRef50_Q3V3R3 Cluster: 16 days neonate cerebellum cDNA, RIKEN
full-length enriched library, clone:9630014M24
product:hypothetical protein, full insert sequence; n=2;
Mus musculus|Rep: 16 days neonate cerebellum cDNA, RIKEN
full-length enriched library, clone:9630014M24
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 148
Score = 48.4 bits (110), Expect = 3e-05
Identities = 27/47 (57%), Positives = 30/47 (63%)
Frame = -1
Query: 244 RVRMSPSRTGPFTFLMI*RLVSPMNSTFT*VHWP*EPVRPSTFTTRA 104
R+ SP RTGP TF M RLVS ++ST T H P EPV PST T A
Sbjct: 80 RLSTSPFRTGPLTFQMKERLVSFIDSTPTCAHCPCEPVLPSTLVTLA 126
>UniRef50_Q8SQM2 Cluster: 40S RIBOSOMAL PROTEIN S28; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S28
- Encephalitozoon cuniculi
Length = 65
Score = 48.4 bits (110), Expect = 3e-05
Identities = 26/55 (47%), Positives = 32/55 (58%)
Frame = +3
Query: 87 DKPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILTLLE 251
++ V VLGRTG G TQVK+E + R I R VKGPV GDI+ +LE
Sbjct: 3 EQQEFFGEVTHVLGRTGGSGLLTQVKMELM-HNKRTIQRAVKGPVAVGDIIEILE 56
>UniRef50_P57710 Cluster: 30S ribosomal protein S28e; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S28e -
Halobacterium salinarium (Halobacterium halobium)
Length = 74
Score = 47.2 bits (107), Expect = 7e-05
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Frame = +3
Query: 105 ARVVKVLGRTGSQGQCTQVK--VEFIGETSRQIIRNVKGPVRDGDILTLLES 254
A V++V+G+TG G+ QVK ++ G R I RNV GPVR GD++ L E+
Sbjct: 13 AEVIEVVGKTGMHGEAMQVKCRIQEGGNQGRIITRNVLGPVRVGDVIQLKET 64
>UniRef50_Q5THV0 Cluster: OTTHUMP00000028879; n=1; Homo sapiens|Rep:
OTTHUMP00000028879 - Homo sapiens (Human)
Length = 57
Score = 42.7 bits (96), Expect = 0.002
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +3
Query: 93 PNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIR 203
P L + KVLGRT SQGQCT+V VEF+ S+++ R
Sbjct: 8 PVKLVKATKVLGRTSSQGQCTRVCVEFMVSQSKRLRR 44
>UniRef50_UPI0000EC9EE1 Cluster: UPI0000EC9EE1 related cluster; n=1;
Gallus gallus|Rep: UPI0000EC9EE1 UniRef100 entry -
Gallus gallus
Length = 112
Score = 39.5 bits (88), Expect = 0.015
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = -3
Query: 263 LHVRFKKSEDVSVTDGSFHVSDDLTAGLPNELDLHLSTLALRTSTAKH 120
L +R ++ EDVS+ HV+DD A + +EL HLS L L A+H
Sbjct: 61 LALRLEQGEDVSLPHRPLHVADDGAARVVHELHAHLSALPLGAGPAQH 108
>UniRef50_Q9IMU3 Cluster: VP1; n=5; Banna virus|Rep: VP1 - Banna virus
Length = 1219
Score = 33.9 bits (74), Expect = 0.72
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -3
Query: 251 FKKSEDVSVTDGSFHVSDDLTAGLPNELDLHLSTLALRTSTAKHFHDTSKNV 96
FK+ DV+ G H+S+ L +P + HL+ L +T K D + ++
Sbjct: 963 FKRKNDVNPDGGGIHISEGLKRLMPEYCERHLNELVYKTLDDKVIRDYTSDI 1014
>UniRef50_A0E074 Cluster: Chromosome undetermined scaffold_71, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_71,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 321
Score = 33.9 bits (74), Expect = 0.72
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3
Query: 156 QVKVEFIGETSRQIIRNVKGPVRDGDILTLLE 251
+++ + +G+ R +IRNV GPVR GD L L+E
Sbjct: 282 KLRFKLVGQ-QRTLIRNVMGPVRKGDTLELME 312
>UniRef50_Q9WVB3 Cluster: Transducin-like enhancer protein 6; n=5;
Eutheria|Rep: Transducin-like enhancer protein 6 - Mus
musculus (Mouse)
Length = 581
Score = 32.7 bits (71), Expect = 1.7
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 186 SRQIIRNVKGPVRDGDILTLLESNVKLGGCDRLLQHYCIRL 308
+++I+RN+KGP L + + N+ GG D L+ + +R+
Sbjct: 418 TQEIVRNLKGPTNSARNLVVKDDNIWTGGLDACLRCWDLRM 458
>UniRef50_UPI0000DB6B2B Cluster: PREDICTED: similar to CG8561-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG8561-PA
- Apis mellifera
Length = 623
Score = 32.3 bits (70), Expect = 2.2
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -3
Query: 188 AGLPNELDLHLSTLALRTSTAKHFHDTSKNVGFIH 84
+GL N DL+LS+ L+ TA F D +N+G++H
Sbjct: 455 SGLENLKDLNLSSNKLQKITADMFADLPQNLGYLH 489
>UniRef50_Q924E0 Cluster: BRCA1; n=38; Eutheria|Rep: BRCA1 - Pedetes
capensis (Springhaas)
Length = 1063
Score = 32.3 bits (70), Expect = 2.2
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 130 RPSTFTTRARTLGLSILACNIELNAINTRAPKLACFEKKTQT 5
+ ST T+A + +SI +ELN N++APK +K+ T
Sbjct: 316 KESTHRTKAEPISISISNMELELNTHNSKAPKKNRLRRKSST 357
>UniRef50_Q55BQ3 Cluster: SCY1 family protein kinase; n=1;
Dictyostelium discoideum AX4|Rep: SCY1 family protein
kinase - Dictyostelium discoideum AX4
Length = 1125
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 24 KHASFGARVLIALSSILQAKMDKPNVLARVVKVLGRTGSQGQCTQVK 164
K +F ++VL A+S+ILQ+K KP VL+ V++ L + Q+K
Sbjct: 423 KKETFQSKVLPAISNILQSKEPKPEVLSCVLENLPMLLQKCSLDQIK 469
>UniRef50_UPI0000E48E73 Cluster: PREDICTED: hypothetical protein;
n=3; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1469
Score = 31.5 bits (68), Expect = 3.9
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -3
Query: 257 VRFKKSEDVSVTDGSFHVSDDLTAGLPNELDLHLSTLALRTSTAKH 120
+R ++ ED DGS + + GLP +L HLS AL T KH
Sbjct: 111 IRMEQGEDGEEQDGSLQATGVPSTGLPPQLHTHLS--ALLTLKRKH 154
>UniRef50_O89232 Cluster: Immediate-early protein; n=2; Canid
herpesvirus 1|Rep: Immediate-early protein - Canid
herpesvirus 1
Length = 1383
Score = 31.5 bits (68), Expect = 3.9
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 174 IGETSRQIIRNVKGPVRDGDILTLLESNVKLGGCDRLLQHYCIRLRHSP 320
+G++S+Q VK D + L+ N KL G D+ L H+C + H P
Sbjct: 471 MGDSSKQYNLLVKLIFESRDAMAWLQ-NSKLSGSDQSLAHFCQKFVHGP 518
>UniRef50_Q7WA21 Cluster: Citrate lyase beta chain; n=3;
Bordetella|Rep: Citrate lyase beta chain - Bordetella
parapertussis
Length = 313
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/83 (24%), Positives = 34/83 (40%)
Frame = +3
Query: 39 GARVLIALSSILQAKMDKPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGP 218
GA L+A A D+P R+V +L + + G V++ + E +R +
Sbjct: 38 GADALVADLEEFTAPADRPAARRRIVALLAQCRAAGVIGAVRINKLEEDGLDDLRGIMAG 97
Query: 219 VRDGDILTLLESNVKLGGCDRLL 287
D L ES ++ DR +
Sbjct: 98 APDAIFLPHAESAAQIAALDRAI 120
>UniRef50_A6LGM6 Cluster: Putative outer membrane protein, probably
involved in nutrient binding; n=1; Parabacteroides
distasonis ATCC 8503|Rep: Putative outer membrane
protein, probably involved in nutrient binding -
Parabacteroides distasonis (strain ATCC 8503 / DSM 20701
/ NCTC11152)
Length = 605
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 156 EYTGPENQYGQALSR-HEQERWVYPFWLVISSLMQLTHVHQS 34
+YTGPE+ YG +SR EQE W + + S ++L +S
Sbjct: 165 QYTGPEDLYGLQVSRDKEQEVWDFILTELDESALELPETRES 206
>UniRef50_Q21QM6 Cluster: Putative uncharacterized protein
precursor; n=1; Rhodoferax ferrireducens T118|Rep:
Putative uncharacterized protein precursor - Rhodoferax
ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)
Length = 240
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 248 KKSEDVSVTDGSFHVSDDLTAGLPNELDLHLSTLALRTSTAK 123
K D+ VT + V+D +T GLP+ +H+S ++ + S K
Sbjct: 113 KMRHDILVTAVYWRVNDHVTNGLPSSQPIHMSQMSRKASEPK 154
>UniRef50_Q4QF64 Cluster: Protein kinase, putative; n=2;
Leishmania|Rep: Protein kinase, putative - Leishmania
major
Length = 2689
Score = 31.1 bits (67), Expect = 5.1
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +3
Query: 33 SFGARVLIALSSILQAKMDKPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVK 212
SF + L S+L+A MDK V A +L QGQ T K+ +GE + + I+N K
Sbjct: 359 SFSSLEADTLESVLKA-MDK-EVHAAGAAIL----EQGQATTEKLYLVGEGTCEAIKNGK 412
Query: 213 --GPVRDGDILTLLESNVKLGGC 275
GP++ G LE K C
Sbjct: 413 SLGPLQPGGTFGELELMYKQAMC 435
>UniRef50_A7S7T2 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 238
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 111 VVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 242
V+ LG T S T++ V+F+ ET RQ++ K P+ D+ T
Sbjct: 173 VIAALGNTWSHAVNTRLIVQFLDETYRQVM-IAKSPIAPFDVFT 215
>UniRef50_A4HNC0 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania braziliensis
Length = 718
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 153 TQVKVEFIGETSRQIIRNVKGPVRDGDILTLLESNVK 263
T +V +G+TS++++R V GPV D + +NV+
Sbjct: 389 TDGRVYLLGQTSQRLVRRVSGPVADAMFVQTKLANVR 425
>UniRef50_P38398 Cluster: Breast cancer type 1 susceptibility
protein; n=217; Eutheria|Rep: Breast cancer type 1
susceptibility protein - Homo sapiens (Human)
Length = 1863
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -1
Query: 130 RPSTFTTRARTLGLSILACNIELNAINTRAPKLACFEKKTQT 5
+ S F T+A + SI +ELN N++APK +K+ T
Sbjct: 576 KESAFKTKAEPISSSISNMELELNIHNSKAPKKNRLRRKSST 617
>UniRef50_A7J6F3 Cluster: Putative uncharacterized protein N099R;
n=2; Paramecium bursaria Chlorella virus A1|Rep:
Putative uncharacterized protein N099R - Chlorella virus
FR483
Length = 323
Score = 30.7 bits (66), Expect = 6.7
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -2
Query: 171 TRPSLEYTGPENQYGQALSRHEQERWVYPFWLVISSLMQL-THVHQSWRVSKKKLRLF 1
T+P +E E++ Q L R E+ RW+ ++L L TH+HQ + SK+ LF
Sbjct: 167 TKP-MELQRGESKEKQILYREEKNRWLKDNKKGFAALKNLVTHIHQIYFTSKQMDELF 223
>UniRef50_A3JPB4 Cluster: Phage integrase; n=3; Rhodobacterales
bacterium HTCC2150|Rep: Phage integrase -
Rhodobacterales bacterium HTCC2150
Length = 298
Score = 30.7 bits (66), Expect = 6.7
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +3
Query: 57 ALSSILQAKMDKPNVLARVVKV--LGRTGSQGQ-CTQVKVEFIGETSRQIIRNVKGPVRD 227
AL +L AK D P + R L TG+ C +K F G+T+ + + + +RD
Sbjct: 197 ALQKLLGAKSDSPYLFPRYASCGYLNNTGASATLCKHLKKSFNGKTTHCLRHSFRDRLRD 256
Query: 228 GDI 236
D+
Sbjct: 257 CDV 259
>UniRef50_Q9LML0 Cluster: F10K1.11 protein; n=15; Magnoliophyta|Rep:
F10K1.11 protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 512
Score = 30.7 bits (66), Expect = 6.7
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +3
Query: 165 VEFIGETSRQIIRNVK---GPVRDGDILTLLESNVKLGGCDRLLQHYCIR 305
VEF GE S I+++V+ V+D +TL+E+ L D L+HY I+
Sbjct: 252 VEFSGELSDFIMKDVRQRYSHVKDDIRVTLIEARDILSSFDDRLRHYAIK 301
>UniRef50_A7IXQ7 Cluster: Putative uncharacterized protein b732L;
n=2; Chlorovirus|Rep: Putative uncharacterized protein
b732L - Paramecium bursaria Chlorella virus NY2A
(PBCV-NY2A)
Length = 76
Score = 30.3 bits (65), Expect = 8.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 140 SGPVYSSEGRVHWGDQPSDHQKRER 214
SG +S + R++W +PSD Q+R R
Sbjct: 15 SGREHSQQRRIYWASRPSDMQQRRR 39
>UniRef50_Q2GL28 Cluster: Flavin reductase family protein; n=6;
Anaplasmataceae|Rep: Flavin reductase family protein -
Anaplasma phagocytophilum (strain HZ)
Length = 164
Score = 30.3 bits (65), Expect = 8.9
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 33 SFGARVLIALSSILQAKMDKPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQI 197
S GA+ + +SS +D P VL + K R + QCT+ V + + + +
Sbjct: 31 SSGAQHGVTVSSFNSVSLDPPLVLFSIQKSSSRFAAFSQCTEFVVNILSDAQKDV 85
>UniRef50_Q1JSI5 Cluster: Putative uncharacterized protein; n=1;
Toxoplasma gondii|Rep: Putative uncharacterized protein -
Toxoplasma gondii
Length = 3127
Score = 30.3 bits (65), Expect = 8.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 14 FFFETRQLWCTCVNCIKLDIT 76
FF+E R LWC C +K +T
Sbjct: 1098 FFWEVRLLWCLCAQSMKYSVT 1118
>UniRef50_A7TAQ7 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 111
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 126 GRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDI 236
G G + Q QV + + GET + ++ V+G GDI
Sbjct: 63 GNQGQRWQMAQVPINYTGETIQLLLEGVRGSDYTGDI 99
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 319,426,889
Number of Sequences: 1657284
Number of extensions: 5712876
Number of successful extensions: 15788
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 15532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15778
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 10394654088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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