Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30393
         (334 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    25   0.99 
AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    23   4.0  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    22   5.3  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    21   9.3  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    21   9.3  
AJ438610-2|CAD27474.1|   92|Anopheles gambiae hypothetical prote...    21   9.3  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 45  RVLIALSSILQAKMDKPNVLARVVKVLGRTGSQGQCT 155
           +VLIALS++L   + K      +V + G +G  G  T
Sbjct: 2   KVLIALSTVLCVVLAKDQPRKAIVYLQGTSGVSGNVT 38


>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 195 IIRNVKGPVRDGDILTLLESNVKL 266
           +IR  K P  D D L++LE  +K+
Sbjct: 285 VIRMEKNPSADQDTLSILEKLLKV 308


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 2   NSLSFFFETRQLWCTCVNCIKLDITSQNG 88
           +SLS    T  +WCT    +KL    Q G
Sbjct: 84  SSLSCLLATIVMWCTGQVLLKLRQAGQGG 112


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 214 PFTFLMI*RLVSPMNSTFT*VH 149
           PF FLM+ R   P+ +  T +H
Sbjct: 504 PFNFLMVRRGTVPLPARITALH 525


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 171 TRPSLEYTGPENQYGQALSRHEQE 100
           +R  LE     ++Y Q +  HE+E
Sbjct: 673 SRSRLEMQKKRSEYSQLIQEHEKE 696


>AJ438610-2|CAD27474.1|   92|Anopheles gambiae hypothetical protein
           protein.
          Length = 92

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -1

Query: 139 EPVRPSTFTTRARTLGLSILACNIELNAINTRAPK 35
           EPVR     T + T  LSI A  I L+  +  +P+
Sbjct: 28  EPVRVPPLATASLTASLSIPAECIVLSVADEPSPE 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,339
Number of Sequences: 2352
Number of extensions: 5885
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23342418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)