Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30393
         (334 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061320-1|AAL28868.1|   65|Drosophila melanogaster LD23674p pro...   105   2e-23
AE014298-1341|AAF46503.2|   65|Drosophila melanogaster CG2998-PA...   105   2e-23
AE014297-4512|AAF56992.1|   64|Drosophila melanogaster CG15527-P...    94   5e-20
BT030166-1|ABN49305.1|   73|Drosophila melanogaster IP17744p pro...    51   4e-07
AE014298-1092|AAF46300.3|  763|Drosophila melanogaster CG1530-PA...    29   1.5  
BT029933-1|ABM92807.1|  575|Drosophila melanogaster IP14249p pro...    28   3.4  
AE014134-2641|AAN10914.1| 1931|Drosophila melanogaster CG18109-P...    28   3.4  
BT030187-1|ABN49326.1|  146|Drosophila melanogaster IP17943p pro...    27   4.4  
BT030165-1|ABN49304.1|  214|Drosophila melanogaster IP17743p pro...    27   4.4  
BT030152-1|ABN49291.1|  146|Drosophila melanogaster IP17643p pro...    27   4.4  
BT011094-1|AAR82760.1|  870|Drosophila melanogaster RE31380p pro...    27   5.9  
AE013599-4028|AAM68331.1|  863|Drosophila melanogaster CG9380-PB...    27   5.9  
AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa cent...    27   7.8  
AE014296-2465|AAZ83989.1| 2897|Drosophila melanogaster CG33957-P...    27   7.8  

>AY061320-1|AAL28868.1|   65|Drosophila melanogaster LD23674p
           protein.
          Length = 65

 Score =  105 bits (251), Expect = 2e-23
 Identities = 50/57 (87%), Positives = 54/57 (94%)
 Frame = +3

Query: 84  MDKPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILTLLES 254
           MDKP V ARV+KVLGRTGSQGQCTQVKVEF+GE +RQIIRNVKGPVR+GDILTLLES
Sbjct: 1   MDKPVVWARVMKVLGRTGSQGQCTQVKVEFLGEQNRQIIRNVKGPVREGDILTLLES 57


>AE014298-1341|AAF46503.2|   65|Drosophila melanogaster CG2998-PA
           protein.
          Length = 65

 Score =  105 bits (251), Expect = 2e-23
 Identities = 50/57 (87%), Positives = 54/57 (94%)
 Frame = +3

Query: 84  MDKPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILTLLES 254
           MDKP V ARV+KVLGRTGSQGQCTQVKVEF+GE +RQIIRNVKGPVR+GDILTLLES
Sbjct: 1   MDKPVVWARVMKVLGRTGSQGQCTQVKVEFLGEQNRQIIRNVKGPVREGDILTLLES 57


>AE014297-4512|AAF56992.1|   64|Drosophila melanogaster CG15527-PA
           protein.
          Length = 64

 Score = 93.9 bits (223), Expect = 5e-20
 Identities = 45/57 (78%), Positives = 52/57 (91%)
 Frame = +3

Query: 84  MDKPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILTLLES 254
           MDKP   ARVV++LGRTGSQGQCTQV+VEF+G+ SRQIIRNVKGPVR GDIL+LLE+
Sbjct: 1   MDKPQY-ARVVEILGRTGSQGQCTQVRVEFLGDQSRQIIRNVKGPVRVGDILSLLET 56


>BT030166-1|ABN49305.1|   73|Drosophila melanogaster IP17744p
           protein.
          Length = 73

 Score = 50.8 bits (116), Expect = 4e-07
 Identities = 21/44 (47%), Positives = 32/44 (72%)
 Frame = +3

Query: 105 ARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDI 236
           ARV+K+L R G++G  T+V+V+ + +   Q +R VKGPVR GD+
Sbjct: 7   ARVIKILNRIGARGILTEVRVQLVDQPKMQFMRTVKGPVRLGDV 50


>AE014298-1092|AAF46300.3|  763|Drosophila melanogaster CG1530-PA
           protein.
          Length = 763

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -2

Query: 138 NQYGQALSRHEQERWVYPFWLVISSLMQLTHVHQSWRV 25
           N Y  A S  E E   YP W +IS L   TH H + ++
Sbjct: 614 NSYYAAFSC-ELEASAYPMWSIISHLQDGTHAHLAKKI 650


>BT029933-1|ABM92807.1|  575|Drosophila melanogaster IP14249p
           protein.
          Length = 575

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -3

Query: 167 DLHLSTLALRTSTAKHFHDTSKNVGFI 87
           DLH+  L L  S     HD  K+V FI
Sbjct: 32  DLHMGILELSVSLGNFTHDVEKSVNFI 58


>AE014134-2641|AAN10914.1| 1931|Drosophila melanogaster CG18109-PA
           protein.
          Length = 1931

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -3

Query: 167 DLHLSTLALRTSTAKHFHDTSKNVGFI 87
           DLH+  L L  S     HD  K+V FI
Sbjct: 32  DLHMGILELSVSLGNFTHDVEKSVNFI 58


>BT030187-1|ABN49326.1|  146|Drosophila melanogaster IP17943p
           protein.
          Length = 146

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +2

Query: 104 CSCRESAWPYWFSGPVYS-SEGRVHW 178
           CSCR S + YW SG + S   G + W
Sbjct: 48  CSCRPSHFVYWLSGLITSLISGAMLW 73


>BT030165-1|ABN49304.1|  214|Drosophila melanogaster IP17743p
           protein.
          Length = 214

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +2

Query: 104 CSCRESAWPYWFSGPVYS-SEGRVHW 178
           CSCR S + YW SG + S   G + W
Sbjct: 116 CSCRPSHFVYWLSGLITSLISGAMLW 141


>BT030152-1|ABN49291.1|  146|Drosophila melanogaster IP17643p
           protein.
          Length = 146

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +2

Query: 104 CSCRESAWPYWFSGPVYS-SEGRVHW 178
           CSCR S + YW SG + S   G + W
Sbjct: 48  CSCRPSHFVYWLSGLITSLISGAMLW 73


>BT011094-1|AAR82760.1|  870|Drosophila melanogaster RE31380p
           protein.
          Length = 870

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +2

Query: 65  LDITSQNG*TQRSCSCRESAWP 130
           L I SQNG T   C+ R  AWP
Sbjct: 745 LTIQSQNGGTYTICTSRTYAWP 766


>AE013599-4028|AAM68331.1|  863|Drosophila melanogaster CG9380-PB,
           isoform B protein.
          Length = 863

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +2

Query: 65  LDITSQNG*TQRSCSCRESAWP 130
           L I SQNG T   C+ R  AWP
Sbjct: 738 LTIQSQNGGTYTICTSRTYAWP 759


>AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa
            centrosomal protein protein.
          Length = 2726

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = +3

Query: 72   LQAKMDKPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDIL 239
            L+A +DK  VL  ++  L    +Q Q   +  E + E ++Q+   V   +RD DIL
Sbjct: 1442 LKASIDKIFVLREIISELE---TQVQTKALNEEVLAEKAQQLEEYVSLQMRDNDIL 1494


>AE014296-2465|AAZ83989.1| 2897|Drosophila melanogaster CG33957-PB,
            isoform B protein.
          Length = 2897

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = +3

Query: 72   LQAKMDKPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDIL 239
            L+A +DK  VL  ++  L    +Q Q   +  E + E ++Q+   V   +RD DIL
Sbjct: 1613 LKASIDKIFVLREIISELE---TQVQTKALNEEVLAEKAQQLEEYVSLQMRDNDIL 1665


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,272,339
Number of Sequences: 53049
Number of extensions: 263262
Number of successful extensions: 1000
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)