Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30390
         (443 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    25   0.24 
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   6.9  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   6.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.9  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   6.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.9  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -2

Query: 352 PAFLSSPCCCPSWRTVWWVSRRIVSAAHVFSRRLTGFR 239
           PA + S C     RT+W  S+ ++   H+  R+    R
Sbjct: 218 PALIISACYAVIVRTIWSKSKLLIPVGHIPIRQCDDHR 255


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 164 TKEGSEDSDGSFNPSGSEEADSDFDPE 244
           +K  +ED+ G+ +P G    +   +PE
Sbjct: 5   SKYSNEDTLGARSPGGDHSENMQDEPE 31


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +3

Query: 111 LMKNMKLIQNRKS 149
           L+KN+K++QN  +
Sbjct: 96  LLKNLKMVQNHNN 108


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +3

Query: 111 LMKNMKLIQNRKS 149
           L+KN+K++QN  +
Sbjct: 96  LLKNLKMVQNHNN 108


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +2

Query: 179 EDSDGSFNPSGSEEADSDFD 238
           ED D   +P   ++ D D D
Sbjct: 228 EDDDNISDPEDDDDKDQDMD 247


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/25 (36%), Positives = 10/25 (40%)
 Frame = +2

Query: 104 GYSDEEYETDPEPKVKGPKPTKEGS 178
           GY    Y  +P P    P P   GS
Sbjct: 197 GYGLRNYGPEPVPSTPYPPPGSLGS 221


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,515
Number of Sequences: 336
Number of extensions: 833
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)