Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30390
         (443 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       23   1.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   3.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   3.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   3.5  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    21   4.6  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   6.1  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   6.1  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             21   6.1  

>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 203 PSGSEEADSDFDPEAG 250
           P    EAD++ DPEAG
Sbjct: 29  PEPEAEADAEADPEAG 44


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 334 PCCCPSWRTVWWVS 293
           P CCPS R V++++
Sbjct: 354 PDCCPSDRMVYFIT 367


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 334 PCCCPSWRTVWWVS 293
           P CCPS R V++++
Sbjct: 354 PDCCPSDRMVYFIT 367


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 334 PCCCPSWRTVWWVS 293
           P CCPS R V++++
Sbjct: 354 PDCCPSDRMVYFIT 367


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +2

Query: 101 RGYSDEEYETDPEPKVKGPKPTKEGSEDSDGSFNPSGSEEADSDFDPE 244
           R   DE+ E + E  V G      G+ +++G       E+ D D D +
Sbjct: 353 RPKKDEDEEEEEEVVVVGRNGAGVGAMNANGEAVGEVDEDDDDDGDDD 400


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 231 TLILKPVRRREKTCAAETIRRET 299
           T IL  +RRR K    + IRR +
Sbjct: 225 TSILLEIRRRSKKSEDDKIRRSS 247


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 209 GSEEADSDFDPEAGEASRKN 268
           G    D+  D EAG ASR N
Sbjct: 132 GEHNGDTVTDVEAGLASRTN 151


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 209 GSEEADSDFDPEAGEASRKN 268
           G    D+  D EAG ASR N
Sbjct: 127 GEHNGDTVTDVEAGLASRTN 146


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,589
Number of Sequences: 438
Number of extensions: 1144
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)