Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30385
         (458 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    24   0.78 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          24   0.78 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.3  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.3  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.3  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.3  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    20   9.6  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 23.8 bits (49), Expect = 0.78
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +3

Query: 186 KLKTFSNVGSNNIKPTRPIGSDFSRAEFGTRSDRESVSETGHRFPEQER 332
           K+   S + S  I  +RP  S     +F  +    S+SE     PE ER
Sbjct: 30  KISDNSGINSQMIDYSRPNWSYLRTPQFEPQQFEVSLSENRSHEPEMER 78


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.8 bits (49), Expect = 0.78
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +3

Query: 186 KLKTFSNVGSNNIKPTRPIGSDFSRAEFGTRSDRESVSETGHRFPEQER 332
           K+   S + S  I  +RP  S     +F  +    S+SE     PE ER
Sbjct: 50  KISDNSGINSQMIDYSRPNWSYLRTPQFEPQQFEVSLSENRSHEPEMER 98


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -1

Query: 155 RPKVLLHNHAGHRTDLTAIAYPCMNARHSWP 63
           R K++   +  H  DL    +    A+H WP
Sbjct: 182 RSKII--EYMNHLVDLGVAGFRVDAAKHMWP 210


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 12/43 (27%), Positives = 13/43 (30%)
 Frame = +3

Query: 231 TRPIGSDFSRAEFGTRSDRESVSETGHRFPEQERWHEEEGHAS 359
           TRP         F  RS  E             RWH   G+ S
Sbjct: 342 TRPAAPANRGNGFPKRSSDEQQWRNNQPSTSNNRWHNNNGNNS 384


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -1

Query: 155 RPKVLLHNHAGHRTDLTAIAYPCMNARHSWP 63
           R K++   +  H  DL    +    A+H WP
Sbjct: 183 RSKII--EYMNHLVDLGVAGFRVDAAKHMWP 211


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -1

Query: 155 RPKVLLHNHAGHRTDLTAIAYPCMNARHSWP 63
           R K++   +  H  DL    +    A+H WP
Sbjct: 183 RSKII--EYMNHLVDLGVAGFRVDAAKHMWP 211


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 179 NVQIKNIFQCRFQ*YK 226
           NV ++ +F CR + YK
Sbjct: 168 NVFLRQVFTCRCKDYK 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,740
Number of Sequences: 336
Number of extensions: 3081
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)