Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30385
         (458 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06617-1|CAA29834.1|  158|Homo sapiens protein ( Human mRNA for ...    91   2e-18
BC100025-1|AAI00026.1|  158|Homo sapiens RPS11 protein protein.        91   2e-18
BC070224-1|AAH70224.1|  158|Homo sapiens ribosomal protein S11 p...    91   2e-18
BC016378-1|AAH16378.1|  158|Homo sapiens ribosomal protein S11 p...    91   2e-18
BC010028-1|AAH10028.1|  158|Homo sapiens ribosomal protein S11 p...    91   2e-18
BC007945-1|AAH07945.1|  158|Homo sapiens RPS11 protein protein.        91   2e-18
BC007603-1|AAH07603.1|  158|Homo sapiens ribosomal protein S11 p...    91   2e-18
BC007283-1|AAH07283.1|  158|Homo sapiens ribosomal protein S11 p...    91   2e-18
AB028893-2|BAA88215.1|  158|Homo sapiens ribosomal protein S11 p...    91   2e-18
U72391-1|AAC51287.1| 1461|Homo sapiens neogenin protein.               29   5.8  
U61262-1|AAB17263.1| 1461|Homo sapiens neogenin protein.               29   5.8  
BC117161-1|AAI17162.1| 1461|Homo sapiens neogenin homolog 1 (chi...    29   5.8  
AB209412-1|BAD92649.1| 1130|Homo sapiens neogenin homolog 1 vari...    29   5.8  

>X06617-1|CAA29834.1|  158|Homo sapiens protein ( Human mRNA for
           ribosomal protein S11. ).
          Length = 158

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 5/64 (7%)
 Frame = +1

Query: 280 QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTG 444
           QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 445 NVSI 456
           NVSI
Sbjct: 65  NVSI 68


>BC100025-1|AAI00026.1|  158|Homo sapiens RPS11 protein protein.
          Length = 158

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 5/64 (7%)
 Frame = +1

Query: 280 QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTG 444
           QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 445 NVSI 456
           NVSI
Sbjct: 65  NVSI 68


>BC070224-1|AAH70224.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 5/64 (7%)
 Frame = +1

Query: 280 QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTG 444
           QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 445 NVSI 456
           NVSI
Sbjct: 65  NVSI 68


>BC016378-1|AAH16378.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 5/64 (7%)
 Frame = +1

Query: 280 QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTG 444
           QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 445 NVSI 456
           NVSI
Sbjct: 65  NVSI 68


>BC010028-1|AAH10028.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 5/64 (7%)
 Frame = +1

Query: 280 QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTG 444
           QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 445 NVSI 456
           NVSI
Sbjct: 65  NVSI 68


>BC007945-1|AAH07945.1|  158|Homo sapiens RPS11 protein protein.
          Length = 158

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 5/64 (7%)
 Frame = +1

Query: 280 QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTG 444
           QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 445 NVSI 456
           NVSI
Sbjct: 65  NVSI 68


>BC007603-1|AAH07603.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 5/64 (7%)
 Frame = +1

Query: 280 QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTG 444
           QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 445 NVSI 456
           NVSI
Sbjct: 65  NVSI 68


>BC007283-1|AAH07283.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 5/64 (7%)
 Frame = +1

Query: 280 QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTG 444
           QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 445 NVSI 456
           NVSI
Sbjct: 65  NVSI 68


>AB028893-2|BAA88215.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 5/64 (7%)
 Frame = +1

Query: 280 QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTG 444
           QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 445 NVSI 456
           NVSI
Sbjct: 65  NVSI 68


>U72391-1|AAC51287.1| 1461|Homo sapiens neogenin protein.
          Length = 1461

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -2

Query: 370  HSYGDACPSSSCHLSCSGKRWPVSETLSLSDLVPNSAREKSEP 242
            HS   A P+ S HL   G  WP+  ++SLSD   ++   ++ P
Sbjct: 1266 HSSSLASPARS-HLYHPGSPWPIGTSMSLSDRANSTESVRNTP 1307


>U61262-1|AAB17263.1| 1461|Homo sapiens neogenin protein.
          Length = 1461

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -2

Query: 370  HSYGDACPSSSCHLSCSGKRWPVSETLSLSDLVPNSAREKSEP 242
            HS   A P+ S HL   G  WP+  ++SLSD   ++   ++ P
Sbjct: 1266 HSSSLASPARS-HLYHPGSPWPIGTSMSLSDRANSTESVRNTP 1307


>BC117161-1|AAI17162.1| 1461|Homo sapiens neogenin homolog 1 (chicken)
            protein.
          Length = 1461

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -2

Query: 370  HSYGDACPSSSCHLSCSGKRWPVSETLSLSDLVPNSAREKSEP 242
            HS   A P+ S HL   G  WP+  ++SLSD   ++   ++ P
Sbjct: 1266 HSSSLASPARS-HLYHPGSPWPIGTSMSLSDRANSTESVRNTP 1307


>AB209412-1|BAD92649.1| 1130|Homo sapiens neogenin homolog 1 variant
            protein.
          Length = 1130

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -2

Query: 370  HSYGDACPSSSCHLSCSGKRWPVSETLSLSDLVPNSAREKSEP 242
            HS   A P+ S HL   G  WP+  ++SLSD   ++   ++ P
Sbjct: 935  HSSSLASPARS-HLYHPGSPWPIGTSMSLSDRANSTESVRNTP 976


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,860,128
Number of Sequences: 237096
Number of extensions: 1919777
Number of successful extensions: 3654
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3645
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)