Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30385
         (458 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73426-1|CAA97792.1|  155|Caenorhabditis elegans Hypothetical pr...    77   5e-15
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    28   2.8  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    28   2.8  
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p...    27   6.6  
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p...    27   6.6  
U70847-1|AAB09106.1|   92|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z73426-1|CAA97792.1|  155|Caenorhabditis elegans Hypothetical
           protein F40F11.1 protein.
          Length = 155

 Score = 77.4 bits (182), Expect = 5e-15
 Identities = 37/63 (58%), Positives = 46/63 (73%), Gaps = 3/63 (4%)
 Frame = +1

Query: 277 DQTEKAFQKQATVFLNRKGGM---KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN 447
           +QTE+AF KQ TV LN K  +    +K  R+ + VGLGFK PR+A+EGTYIDKKCP+ GN
Sbjct: 3   EQTERAFLKQPTVNLNNKARILAGSKKTPRYIREVGLGFKAPRDAVEGTYIDKKCPWAGN 62

Query: 448 VSI 456
           V I
Sbjct: 63  VPI 65


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 343  SSCHLSCSGKRWPVSETLSLSD 278
            +SC++ CSG++W   E  S S+
Sbjct: 1011 ASCYIDCSGRKWNYGEWTSCSE 1032


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 343  SSCHLSCSGKRWPVSETLSLSD 278
            +SC++ CSG++W   E  S S+
Sbjct: 1011 ASCYIDCSGRKWNYGEWTSCSE 1032


>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
           protein C25G4.10 protein.
          Length = 1208

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = +2

Query: 119 GVRHDC-----ATTLLVWIARTATMNVQIKNIFQCRFQ*YKTYTS 238
           GV+HDC      +T  + +     +N+ ++ I+QC  Q Y+T+ S
Sbjct: 224 GVQHDCLEICSGSTKELGVHSVLCLNLDLQAIYQCIRQGYETHPS 268


>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical
           protein T04A11.3 protein.
          Length = 1014

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = +2

Query: 119 GVRHDC-----ATTLLVWIARTATMNVQIKNIFQCRFQ*YKTYTS 238
           GV+HDC      +T  + +     +N+ ++ I+QC  Q Y+T+ S
Sbjct: 45  GVQHDCLEICSGSTKELGVHSVLCLNLDLQAIYQCIRQGYETHPS 89


>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
           protein C25G4.10 protein.
          Length = 1208

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = +2

Query: 119 GVRHDC-----ATTLLVWIARTATMNVQIKNIFQCRFQ*YKTYTS 238
           GV+HDC      +T  + +     +N+ ++ I+QC  Q Y+T+ S
Sbjct: 224 GVQHDCLEICSGSTKELGVHSVLCLNLDLQAIYQCIRQGYETHPS 268


>U70847-1|AAB09106.1|   92|Caenorhabditis elegans Hypothetical
           protein K09B3.2 protein.
          Length = 92

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 107 LSPFGVRHDCATTLLVWIARTATMNVQIKN 196
           + PFG   D    +LVW  +T+T N+   N
Sbjct: 44  IEPFGYEKDKDREILVWHTKTSTPNIVKSN 73


>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
            F54B3.1b protein.
          Length = 3394

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 195  TFSNVGSNNIKPTRPIGSDFSRAEFGTRSDRESVSE 302
            T S+  S++ +P  P  SD+S  E  TR+D  ++ E
Sbjct: 1457 TGSSSSSDDPRPGSPPSSDYSDTESRTRADSATLGE 1492


>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
            F54B3.1a protein.
          Length = 3396

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 195  TFSNVGSNNIKPTRPIGSDFSRAEFGTRSDRESVSE 302
            T S+  S++ +P  P  SD+S  E  TR+D  ++ E
Sbjct: 1457 TGSSSSSDDPRPGSPPSSDYSDTESRTRADSATLGE 1492


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,326,038
Number of Sequences: 27780
Number of extensions: 287898
Number of successful extensions: 739
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)