Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30383
(657 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 141 7e-35
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 82 6e-17
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 75 1e-14
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 73 4e-14
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 62 9e-11
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 54 2e-08
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 46 5e-06
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 39 6e-04
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 36 0.005
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 34 0.016
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 31 0.15
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 29 0.45
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 28 1.0
SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|... 27 2.4
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 27 2.4
SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyce... 27 2.4
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 27 3.1
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 27 3.1
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 27 3.1
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 27 3.1
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 26 5.5
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 7.3
SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces po... 25 9.6
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 141 bits (342), Expect = 7e-35
Identities = 63/82 (76%), Positives = 74/82 (90%)
Frame = +1
Query: 253 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 432
NGTIDF EFLTMMARKMKDTD+EEE+REAF+VFDKDGNG+I+ EL HV+T+LGE+L+ E
Sbjct: 62 NGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQE 121
Query: 433 EVDEMIREADIDGDGQVNYEEF 498
EV +MIREAD DGDG +NYEEF
Sbjct: 122 EVADMIREADTDGDGVINYEEF 143
Score = 98.7 bits (235), Expect = 6e-22
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +2
Query: 86 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 253
LT+EQIAEF+EAFSLFD+D DG IT+ ELG VMRSLGQ+PT AELQDMINEVDADG
Sbjct: 6 LTDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADG 61
Score = 66.1 bits (154), Expect = 4e-12
Identities = 33/77 (42%), Positives = 49/77 (63%)
Frame = +1
Query: 286 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 465
M R + D + E REAF +FD+D +G I++ EL VM +LG+ T E+ +MI E D
Sbjct: 1 MTTRNLTD-EQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDA 59
Query: 466 DGDGQVNYEEFVTMRRR 516
DG+G +++ EF+TM R
Sbjct: 60 DGNGTIDFTEFLTMMAR 76
Score = 58.4 bits (135), Expect = 8e-10
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = +2
Query: 74 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 253
M D EE++ +EAF +FDKDG+G IT +EL V+ SLG+ ++ E+ DMI E D DG
Sbjct: 78 MKDTDNEEEV---REAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDG 134
Score = 31.5 bits (68), Expect = 0.11
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 104 AEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 253
AE ++ + D DG+GTI E T+M R + E E+++ D DG
Sbjct: 48 AELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDG 98
Score = 29.9 bits (64), Expect = 0.34
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 253 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN 408
NG I E LT + + + S+EE+ + R D DG+G I+ E V+++
Sbjct: 99 NGYITVEE-LTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRVISS 149
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 82.2 bits (194), Expect = 6e-17
Identities = 37/80 (46%), Positives = 55/80 (68%)
Frame = +1
Query: 262 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 441
ID +F++ ++ K+++T+SEEE +AFRVFDKD +G+I A+ M LGEKL+D EV
Sbjct: 58 IDEKKFMSFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQ 117
Query: 442 EMIREADIDGDGQVNYEEFV 501
M++EAD G +Y +FV
Sbjct: 118 LMVQEADPTNSGSFDYYDFV 137
Score = 56.0 bits (129), Expect = 4e-09
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +2
Query: 89 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV 241
++EQ E KEAF L+D D DG I T +G+V+RSLG N T+AEL + NE+
Sbjct: 4 SKEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL 54
Score = 43.2 bits (97), Expect = 3e-05
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +2
Query: 68 STMADQLTE-EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 244
S ++++L E E E+ +AF +FDKD G I T + M++LG+ ++ E+Q M+ E D
Sbjct: 65 SFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEAD 124
Score = 37.1 bits (82), Expect = 0.002
Identities = 20/79 (25%), Positives = 41/79 (51%)
Frame = +1
Query: 313 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 492
+ +E++EAF ++D D +G I + + V+ +LG +TD E+ ++ E D + +
Sbjct: 6 EQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNELG-DAIDEKKFM 64
Query: 493 EFVTMRRRSEPPASVCVKS 549
FV+ + R +K+
Sbjct: 65 SFVSNKLRETESEEEYIKA 83
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 74.5 bits (175), Expect = 1e-14
Identities = 33/84 (39%), Positives = 51/84 (60%)
Frame = +1
Query: 256 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 435
G + +F+ +M K+ + D EEI+ AF +FD D G IS LR V L E + D+E
Sbjct: 88 GYLQMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQE 147
Query: 436 VDEMIREADIDGDGQVNYEEFVTM 507
++ MI E D+D DG++N +EF+ +
Sbjct: 148 LEAMIEEFDLDQDGEINEQEFIAI 171
Score = 48.8 bits (111), Expect = 7e-07
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2
Query: 83 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 253
++TEEQ + EAF LFD D D I EL MR+LG N ++E+ ++ + D G
Sbjct: 30 EITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTG 86
Score = 46.0 bits (104), Expect = 5e-06
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +1
Query: 313 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 492
+ ++I EAF++FD D + I ELR M LG EV +++R+ D G G + E
Sbjct: 34 EQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQME 93
Query: 493 EFV 501
+FV
Sbjct: 94 DFV 96
Score = 32.7 bits (71), Expect = 0.048
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 250 RNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT-NLGEKLT 426
++ ID+ E M R + + E+ + R FDK G G++ + VMT + E+
Sbjct: 50 KDNAIDYHELRAAM-RALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVRVMTEKIVERDP 108
Query: 427 DEEVDEMIREADIDGDGQVN 486
EE+ D D G+++
Sbjct: 109 LEEIKRAFELFDDDETGKIS 128
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 72.9 bits (171), Expect = 4e-14
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 IDFPEFLTMMARKMK-DTDSE-EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 435
+D +FL ++ R D + EE + F+VFDKD G I ELR+V+T+LGEKL++EE
Sbjct: 55 VDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEE 114
Query: 436 VDEMIREADIDGDGQVNYEEFVTM 507
+DE+++ + DG VNY +FV M
Sbjct: 115 MDELLKGVPVK-DGMVNYHDFVQM 137
Score = 48.0 bits (109), Expect = 1e-06
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +2
Query: 110 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 250
+K+AFSLFD+ G G I +G ++R+ GQNPT AE+ ++ + + A+
Sbjct: 8 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAE 54
Score = 37.1 bits (82), Expect = 0.002
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 107 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV 241
EF + F +FDKD G I EL V+ SLG+ + E+ +++ V
Sbjct: 78 EFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGV 122
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +1
Query: 331 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMR 510
++AF +FD+ G G I + ++ G+ T E+ E+ E+ + +V+ E+F+ +
Sbjct: 9 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI--ESTL--PAEVDMEQFLQVL 64
Query: 511 RR 516
R
Sbjct: 65 NR 66
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 61.7 bits (143), Expect = 9e-11
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Frame = +1
Query: 256 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEK 420
G +DF EF+ ++ + EE+++ AF+++D D +G+IS EL V+ TNL E
Sbjct: 71 GDVDFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLRED 130
Query: 421 LTDEEVDEMIREADIDGDGQVNYEEFVTMRRRSEPPASVCVKS 549
+ VD+ I E D D DG++++EEF + S +S+ + S
Sbjct: 131 QLQQIVDKTIMEVDKDRDGKISFEEFKDIVSGSNVTSSMTLDS 173
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 54.0 bits (124), Expect = 2e-08
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +2
Query: 83 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 244
QLT QI E KEAF+L DKDGDG I +++ T++ SL Q+ +E + M ++
Sbjct: 41 QLTSSQIQELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFESIN 94
Score = 44.0 bits (99), Expect = 2e-05
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +1
Query: 253 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 432
N I+ FLT M + ++ EAF FD +G I + +R ++++G+++ +
Sbjct: 94 NPPINLAAFLTAMGSMLCRISPRNDLLEAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQ 153
Query: 433 EVDEMIREADIDGDGQVNYEEFV 501
EV+ ++R G YE+FV
Sbjct: 154 EVESILR--SYTSHGVFYYEKFV 174
Score = 38.3 bits (85), Expect = 0.001
Identities = 13/42 (30%), Positives = 30/42 (71%)
Frame = +1
Query: 322 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 447
+E++EAF + DKDG+G I +++ ++T+L + +++ ++ M
Sbjct: 48 QELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHM 89
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +2
Query: 116 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 253
EAFS FD G I + + S+G E++ ++ + G
Sbjct: 121 EAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESILRSYTSHG 166
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 46.0 bits (104), Expect = 5e-06
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +1
Query: 289 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 468
M+ K + +EE EAF +FD G+I +LR LGE LT E++ M+ D+
Sbjct: 1 MSVSTKRLEMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLML---DLA 57
Query: 469 G-DGQVNYEEFVTM 507
G +G+V+ EEF +
Sbjct: 58 GTNGKVSREEFAEL 71
Score = 33.5 bits (73), Expect = 0.027
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2
Query: 95 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 253
E E +EAF LFD G I ++L LG+N T+ +LQ M++ +G
Sbjct: 9 EMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDLAGTNG 61
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 39.1 bits (87), Expect = 6e-04
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Frame = +1
Query: 250 RNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE---- 417
+NG IDF EF+ ++ + + +++ AF+++D D NG IS E+ ++ + +
Sbjct: 76 KNGYIDFKEFICALSVTSRG-ELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGS 134
Query: 418 --KLTDEE------VDEMIREADIDGDGQVNYEEFVTMRRR 516
KL ++E V+++ D + DGQ+ EEF +R
Sbjct: 135 MVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKR 175
Score = 30.7 bits (66), Expect = 0.19
Identities = 18/83 (21%), Positives = 37/83 (44%)
Frame = +1
Query: 253 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 432
+G ++ EF + + D F VFD D NG+I E ++ ++
Sbjct: 40 SGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELND 99
Query: 433 EVDEMIREADIDGDGQVNYEEFV 501
++ + D+D +G ++Y+E +
Sbjct: 100 KLIWAFQLYDLDNNGLISYDEML 122
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 35.9 bits (79), Expect = 0.005
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +1
Query: 289 MARKMKDTDSEE--EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 462
+ +K + +EE + + F D DG G++ + +K + +EV E IRE +
Sbjct: 6 LQKKYPELTNEEILTLTDQFNKLDVDGKGYLDQPTTIKAFED-SKKGSYDEVREAIREVN 64
Query: 463 IDGDGQVNYEEFV 501
+D G+V E+FV
Sbjct: 65 VDSSGRVEPEDFV 77
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 34.3 bits (75), Expect = 0.016
Identities = 18/64 (28%), Positives = 38/64 (59%)
Frame = +1
Query: 307 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 486
D + + E FR + + NG++S ++ V+ + KL+ ++++++ ADID DG +
Sbjct: 2 DPQEKNKYWEIFRGLNPE-NGYLSGSKAAGVLRS--SKLSSDKLEKIWDLADIDDDGMFD 58
Query: 487 YEEF 498
++EF
Sbjct: 59 FDEF 62
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 31.1 bits (67), Expect = 0.15
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -1
Query: 474 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAE 340
V++ I L ++ L+ FLSE + +G+ DEA+ V+ ++AE
Sbjct: 180 VSIGINLLWGIITLVGVSFLSESPRYLVSIGKDDEAIQVMCKNAE 224
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 29.5 bits (63), Expect = 0.45
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -1
Query: 474 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAEGLAD 328
V++ I L ++ ++ FL E + Q+G+ +EAV VL E AE D
Sbjct: 184 VSIGINLLWGIITMIGILFLPESPRYLIQVGKDEEAVRVLSESAELFPD 232
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 28.3 bits (60), Expect = 1.0
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 80 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEV 241
D+ E A + +S+FD+D +G IT +E+ +G + A L+D+ + +
Sbjct: 538 DETGEVDNATLEACYSIFDRDLNGDITCEEIELACVEIGKERKSISASLRDLNDSI 593
>SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 699
Score = 27.1 bits (57), Expect = 2.4
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +1
Query: 310 TDSEEEIREAF--RVFDKDGNGFISAA--ELRHVMT-NLGEKLTDEEVDEMIREADIDGD 474
+D E +EAF +V + IS ELR M N GE + DEE ++ + D +G+
Sbjct: 619 SDKISESKEAFDAKVEEISDQRAISQRYYELRKKMIDNTGEYIKDEE-EQAVIPLDENGN 677
Query: 475 GQVNYEEFVTMRRRSEPP 528
+ F+T R R P
Sbjct: 678 EKPKMSRFMTARLRGRVP 695
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 397 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 495
V + E+ +EE DEM E D +G+G EE
Sbjct: 170 VQPDADEEEEEEEADEMEEEFDEEGEGDEEEEE 202
>SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 27.1 bits (57), Expect = 2.4
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 292 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 468
AR++K I + ++ D+ + +A EL V LG+ +TD VDE +A+++
Sbjct: 113 ARQLKSQSKNVSIEKIEKLQDEIQDYMDAAGELNEV---LGQNMTDINVDEEELDAELE 168
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +1
Query: 349 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 462
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAE 521
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 224 LEVRLLWGSVLATSSRCPALWS*WCHR 144
LE++ WGS+ A + +W+ W R
Sbjct: 850 LEMKNYWGSISALCDKMSEIWADWVQR 876
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +1
Query: 349 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 462
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAE 521
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 614 EMQSNTMLILCVMKQNVYLNSLLFTHTLAGGSLRR 510
E S T+L + +M QN +LN+ F H A + R+
Sbjct: 196 ENGSQTVLEILLMNQNSFLNNFNFEHIKADFAFRQ 230
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 486 IDLAVAVDIGLANHLVDLLVSEFLSEVGHDVAQL 385
+D++V +D+ +H L S LS HDV Q+
Sbjct: 28 VDVSVDIDVIFPDHTQTLSFSLLLSNTIHDVRQV 61
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 25.4 bits (53), Expect = 7.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 116 EAFSLFDKDGDGTITTKELGTVMR 187
+ F FD+D DG + +EL + R
Sbjct: 311 DLFYQFDRDNDGALNNEELSALFR 334
>SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 811
Score = 25.0 bits (52), Expect = 9.6
Identities = 9/43 (20%), Positives = 22/43 (51%)
Frame = +1
Query: 409 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMRRRSEPPASV 537
+G ++ ++ ++++E + G V +RRR PP ++
Sbjct: 499 VGTLMSKRKIMKLVKEGYVHGWNDPRLYTLVALRRRGVPPGAI 541
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,190,062
Number of Sequences: 5004
Number of extensions: 38150
Number of successful extensions: 156
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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