Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30382
(667 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M62762-1|AAA60039.1| 155|Homo sapiens vacuolar H+ ATPase proton... 77 8e-14
CR541951-1|CAG46749.1| 155|Homo sapiens ATP6V0C protein. 77 8e-14
CR541930-1|CAG46728.1| 155|Homo sapiens ATP6V0C protein. 77 8e-14
BT007155-1|AAP35819.1| 155|Homo sapiens ATPase, H+ transporting... 77 8e-14
BC009290-1|AAH09290.1| 155|Homo sapiens ATPase, H+ transporting... 77 8e-14
BC007759-1|AAH07759.1| 155|Homo sapiens ATPase, H+ transporting... 77 8e-14
BC007389-1|AAH07389.1| 155|Homo sapiens ATPase, H+ transporting... 77 8e-14
BC004537-1|AAH04537.1| 155|Homo sapiens ATPase, H+ transporting... 77 8e-14
D89052-1|BAA13753.1| 205|Homo sapiens proton-ATPase-like protei... 38 0.043
CR456972-1|CAG33253.1| 205|Homo sapiens ATP6V0B protein. 38 0.043
BT007151-1|AAP35815.1| 205|Homo sapiens ATPase, H+ transporting... 38 0.043
BC005876-1|AAH05876.1| 205|Homo sapiens ATPase, H+ transporting... 38 0.043
BC000423-1|AAH00423.1| 205|Homo sapiens ATPase, H+ transporting... 38 0.043
AL357079-17|CAI16801.1| 205|Homo sapiens ATPase, H+ transportin... 38 0.043
BC071584-1|AAH71584.1| 689|Homo sapiens PRDM8 protein protein. 30 8.5
BC052973-1|AAH52973.1| 1187|Homo sapiens PCDH12 protein protein. 30 8.5
BC042634-1|AAH42634.1| 1187|Homo sapiens PCDH12 protein protein. 30 8.5
AY358428-1|AAQ88794.1| 1184|Homo sapiens PCDH12 protein. 30 8.5
AK024140-1|BAB14837.1| 1187|Homo sapiens protein ( Homo sapiens ... 30 8.5
AK023785-1|BAB14677.1| 808|Homo sapiens protein ( Homo sapiens ... 30 8.5
AF240635-1|AAF73962.1| 1184|Homo sapiens vascular endothelial ca... 30 8.5
AF231025-1|AAF61931.1| 1184|Homo sapiens protocadherin 12 protein. 30 8.5
AB026893-1|BAA95162.1| 1184|Homo sapiens vascular cadherin-2 pro... 30 8.5
>M62762-1|AAA60039.1| 155|Homo sapiens vacuolar H+ ATPase proton
channel subunit protein.
Length = 155
Score = 76.6 bits (180), Expect = 8e-14
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 114 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>CR541951-1|CAG46749.1| 155|Homo sapiens ATP6V0C protein.
Length = 155
Score = 76.6 bits (180), Expect = 8e-14
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 114 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>CR541930-1|CAG46728.1| 155|Homo sapiens ATP6V0C protein.
Length = 155
Score = 76.6 bits (180), Expect = 8e-14
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 114 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BT007155-1|AAP35819.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 76.6 bits (180), Expect = 8e-14
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 114 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC009290-1|AAH09290.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 76.6 bits (180), Expect = 8e-14
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 114 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC007759-1|AAH07759.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 76.6 bits (180), Expect = 8e-14
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 114 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC007389-1|AAH07389.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 76.6 bits (180), Expect = 8e-14
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 114 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC004537-1|AAH04537.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 76.6 bits (180), Expect = 8e-14
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 114 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>D89052-1|BAA13753.1| 205|Homo sapiens proton-ATPase-like protein
protein.
Length = 205
Score = 37.5 bits (83), Expect = 0.043
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAI 112
G AQ P LFV ++++ IF +GL+G+IVAI
Sbjct: 159 GSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAI 195
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
G + + G + PR+ ++ +IF E + +YG+I+AI +
Sbjct: 73 GSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
>CR456972-1|CAG33253.1| 205|Homo sapiens ATP6V0B protein.
Length = 205
Score = 37.5 bits (83), Expect = 0.043
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAI 112
G AQ P LFV ++++ IF +GL+G+IVAI
Sbjct: 159 GSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAI 195
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
G + + G + PR+ ++ +IF E + +YG+I+AI +
Sbjct: 73 GSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
>BT007151-1|AAP35815.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit c'' protein.
Length = 205
Score = 37.5 bits (83), Expect = 0.043
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAI 112
G AQ P LFV ++++ IF +GL+G+IVAI
Sbjct: 159 GSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAI 195
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
G + + G + PR+ ++ +IF E + +YG+I+AI +
Sbjct: 73 GSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
>BC005876-1|AAH05876.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 37.5 bits (83), Expect = 0.043
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAI 112
G AQ P LFV ++++ IF +GL+G+IVAI
Sbjct: 159 GSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAI 195
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
G + + G + PR+ ++ +IF E + +YG+I+AI +
Sbjct: 73 GSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
>BC000423-1|AAH00423.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 37.5 bits (83), Expect = 0.043
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAI 112
G AQ P LFV ++++ IF +GL+G+IVAI
Sbjct: 159 GSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAI 195
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
G + + G + PR+ ++ +IF E + +YG+I+AI +
Sbjct: 73 GSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
>AL357079-17|CAI16801.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 37.5 bits (83), Expect = 0.043
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAI 112
G AQ P LFV ++++ IF +GL+G+IVAI
Sbjct: 159 GSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAI 195
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
G + + G + PR+ ++ +IF E + +YG+I+AI +
Sbjct: 73 GSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
>BC071584-1|AAH71584.1| 689|Homo sapiens PRDM8 protein protein.
Length = 689
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 161 RAPSLYAHYLSLKTRTGMVVAGSGSTLHRVSGTLPLLYITFVPCSFSHISRPVQPCCCGC 340
++P LYA K+ A + + + LP +T +P SF+ + P Q C C
Sbjct: 572 QSPFLYATAFWPKSSAAAAAAAAAAAAGPLQLQLPSA-LTLLPPSFTSLCLPAQNWCAKC 630
Query: 341 SAS 349
+AS
Sbjct: 631 NAS 633
>BC052973-1|AAH52973.1| 1187|Homo sapiens PCDH12 protein protein.
Length = 1187
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 14 VRGTAQQP-RLFVGMILILIFAEVLGLYGLIVAIYL 118
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>BC042634-1|AAH42634.1| 1187|Homo sapiens PCDH12 protein protein.
Length = 1187
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 14 VRGTAQQP-RLFVGMILILIFAEVLGLYGLIVAIYL 118
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>AY358428-1|AAQ88794.1| 1184|Homo sapiens PCDH12 protein.
Length = 1184
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 14 VRGTAQQP-RLFVGMILILIFAEVLGLYGLIVAIYL 118
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>AK024140-1|BAB14837.1| 1187|Homo sapiens protein ( Homo sapiens
cDNA FLJ14078 fis, clone HEMBB1002044, moderately
similar to Mus musculus mRNA for vascular cadherin-2. ).
Length = 1187
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 14 VRGTAQQP-RLFVGMILILIFAEVLGLYGLIVAIYL 118
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>AK023785-1|BAB14677.1| 808|Homo sapiens protein ( Homo sapiens
cDNA FLJ13723 fis, clone PLACE2000458, weakly similar to
CADHERIN-RELATED TUMOR SUPPRESSOR PRECURSOR. ).
Length = 808
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 14 VRGTAQQP-RLFVGMILILIFAEVLGLYGLIVAIYL 118
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 326 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 361
>AF240635-1|AAF73962.1| 1184|Homo sapiens vascular endothelial
cadherin 2 protein.
Length = 1184
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 14 VRGTAQQP-RLFVGMILILIFAEVLGLYGLIVAIYL 118
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>AF231025-1|AAF61931.1| 1184|Homo sapiens protocadherin 12 protein.
Length = 1184
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 14 VRGTAQQP-RLFVGMILILIFAEVLGLYGLIVAIYL 118
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>AB026893-1|BAA95162.1| 1184|Homo sapiens vascular cadherin-2
protein.
Length = 1184
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 14 VRGTAQQP-RLFVGMILILIFAEVLGLYGLIVAIYL 118
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,073,413
Number of Sequences: 237096
Number of extensions: 2074924
Number of successful extensions: 8138
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 7963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8138
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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