Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30382
(667 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 75 6e-14
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 75 6e-14
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 75 6e-14
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 75 6e-14
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 69 3e-12
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 69 3e-12
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 35 0.045
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 35 0.045
AF099919-3|AAC68801.2| 862|Caenorhabditis elegans Hypothetical ... 30 1.7
U41541-2|ABA54426.1| 526|Caenorhabditis elegans Hypothetical pr... 28 6.8
U41541-1|ABA54425.1| 795|Caenorhabditis elegans Hypothetical pr... 28 6.8
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 74.5 bits (175), Expect = 6e-14
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVRGTAQQPRLFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 120 GDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +2
Query: 32 QPRLFVGMILILIFAEVLGLYGLIVAIYL 118
+P L + ++ +I A ++G+YGL+VA+ L
Sbjct: 51 RPELIMKSVIPVIMAGIIGIYGLVVAMVL 79
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 74.5 bits (175), Expect = 6e-14
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVRGTAQQPRLFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 120 GDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +2
Query: 32 QPRLFVGMILILIFAEVLGLYGLIVAIYL 118
+P L + ++ +I A ++G+YGL+VA+ L
Sbjct: 51 RPELIMKSVIPVIMAGIIGIYGLVVAMVL 79
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 74.5 bits (175), Expect = 6e-14
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVRGTAQQPRLFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 120 GDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +2
Query: 32 QPRLFVGMILILIFAEVLGLYGLIVAIYL 118
+P L + ++ +I A ++G+YGL+VA+ L
Sbjct: 51 RPELIMKSVIPVIMAGIIGIYGLVVAMVL 79
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 74.5 bits (175), Expect = 6e-14
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVRGTAQQPRLFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 120 GDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +2
Query: 32 QPRLFVGMILILIFAEVLGLYGLIVAIYL 118
+P L + ++ +I A ++G+YGL+VA+ L
Sbjct: 51 RPELIMKSVIPVIMAGIIGIYGLVVAMVL 79
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVR +QQPR+FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 128 GDAGVRALSQQPRMFVGMILILIFAEVLGLYGMIVALIL 166
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVR +QQPR+FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 128 GDAGVRALSQQPRMFVGMILILIFAEVLGLYGMIVALIL 166
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 35.1 bits (77), Expect = 0.045
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAI 112
G A P LFV +++I IFA +GL+G+I+ I
Sbjct: 167 GSGAAIADAANPALFVKILIIEIFASAIGLFGMIIGI 203
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 35.1 bits (77), Expect = 0.045
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAI 112
G A P LFV +++I IFA +GL+G+I+ I
Sbjct: 167 GSGAAIADAANPALFVKILIIEIFASAIGLFGMIIGI 203
>AF099919-3|AAC68801.2| 862|Caenorhabditis elegans Hypothetical
protein F40G9.9 protein.
Length = 862
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 464 NLLHICFIFGDRREHSFAISIDISVLFARHIL 559
N++H+C+ DR +H F + + +LF +L
Sbjct: 327 NMIHMCYKTFDRHQHQFLVEDECVILFVPDLL 358
>U41541-2|ABA54426.1| 526|Caenorhabditis elegans Hypothetical
protein C41A3.2b protein.
Length = 526
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 513 KECSLLSPKIKHMCNKLIKYWGVIAR*HSCSI 418
K S+++ K+ H CN + Y V A H C++
Sbjct: 207 KSASVINEKVNHNCNICVVYAPVAATTHVCTM 238
>U41541-1|ABA54425.1| 795|Caenorhabditis elegans Hypothetical
protein C41A3.2a protein.
Length = 795
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 513 KECSLLSPKIKHMCNKLIKYWGVIAR*HSCSI 418
K S+++ K+ H CN + Y V A H C++
Sbjct: 207 KSASVINEKVNHNCNICVVYAPVAATTHVCTM 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,042,619
Number of Sequences: 27780
Number of extensions: 334499
Number of successful extensions: 892
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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