Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30382
(667 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipi... 66 2e-11
At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipi... 66 2e-11
At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipi... 66 2e-11
At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipi... 66 2e-11
At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipi... 66 2e-11
At4g32530.1 68417.m04631 vacuolar ATP synthase, putative / V-ATP... 33 0.17
At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C su... 33 0.17
At5g65910.1 68418.m08296 BSD domain-containing protein contains ... 31 0.69
At5g37620.1 68418.m04531 DC1 domain-containing protein contains ... 31 0.91
At5g17500.1 68418.m02053 glycosyl hydrolase family 5 protein / c... 29 2.1
At2g41300.1 68415.m05100 strictosidine synthase family protein s... 29 3.7
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 28 4.9
At2g31040.1 68415.m03786 ATP synthase protein I -related contain... 28 4.9
At5g67340.1 68418.m08492 armadillo/beta-catenin repeat family pr... 28 6.4
At1g59640.2 68414.m06708 basic helix-loop-helix (bHLH) family pr... 27 8.5
>At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipid
subunit 3 / V-ATPase 16 kDa proteolipid subunit 3
(AVAP3) (AVA-P3) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/39 (82%), Positives = 33/39 (84%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVR AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 116 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIIL 154
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 32 QPRLFVGMILILIFAEVLGLYGLIVAIYL 118
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 47 RPELVMKSIVPVVMAGVLGIYGLIIAVII 75
>At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipid
subunit 1 / V-ATPase 16 kDa proteolipid subunit 1
(AVAP1) (AVA-P1) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/39 (82%), Positives = 33/39 (84%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVR AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 116 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIIL 154
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 32 QPRLFVGMILILIFAEVLGLYGLIVAIYL 118
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 47 RPELVMKSIVPVVMAGVLGIYGLIIAVII 75
>At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipid
subunit 5 / V-ATPase 16 kDa proteolipid subunit 5
(AVAP5) identical to SP|P59227 Vacuolar ATP synthase 16
kDa proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16
kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana}
GI:926929; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/39 (82%), Positives = 33/39 (84%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVR AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 116 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIIL 154
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 32 QPRLFVGMILILIFAEVLGLYGLIVAIYL 118
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 47 RPELVMKSIVPVVMAGVLGIYGLIIAVII 75
>At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipid
subunit 4 / V-ATPase 16 kDa proteolipid subunit 4
(AVAP4) (AVA-P4) identical to SP|P59229 Vacuolar ATP
synthase 16 kDa proteolipid subunit 4 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 4) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 166
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/39 (82%), Positives = 33/39 (84%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVR AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 118 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIIL 156
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 32 QPRLFVGMILILIFAEVLGLYGLIVAIYL 118
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 49 RPELVMKSIVPVVMAGVLGIYGLIIAVII 77
>At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipid
subunit 2 / V-ATPase 16 kDa proteolipid subunit 2
(AVAP2) (AVA-P2) identical to SP|Q39039 Vacuolar ATP
synthase 16 kDa proteolipid subunit 2 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 2 {Arabidopsis
thaliana}, nearly identical to vacuolar H+-ATPase
proteolipid (16 kDa) subunit GI:755147 from [Gossypium
hirsutum]
Length = 165
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/39 (82%), Positives = 33/39 (84%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
GDAGVR AQQP+LFVGMILILIFAE L LYGLIV I L
Sbjct: 117 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIIL 155
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 32 QPRLFVGMILILIFAEVLGLYGLIVAIYL 118
+P L + I+ ++ A VLG+YGLI+A+ +
Sbjct: 48 RPELVMKSIVPVVMAGVLGIYGLIIAVII 76
>At4g32530.1 68417.m04631 vacuolar ATP synthase, putative /
V-ATPase, putative SP|P23968 Vacuolar ATP synthase 22
kDa proteolipid subunit (EC 3.6.3.14) {Saccharomyces
cerevisiae}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 180
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
G + AQ LFV +++I IF LGL+G+IV I +
Sbjct: 133 GSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIM 171
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
G + + + PR+ ++ +IF E + +YG+IVAI L
Sbjct: 49 GSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVAIIL 87
>At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C
subunit family protein similar to SP|P23968 Vacuolar ATP
synthase 22 kDa proteolipid subunit (EC 3.6.3.14)
{Saccharomyces cerevisiae}; contains Pfam profile
PF00137: ATP synthase subunit C
Length = 178
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
G + AQ LFV +++I IF LGL+G+IV I +
Sbjct: 131 GSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIM 169
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 2 GDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 118
G + + + PR+ ++ +IF E + +YG+IVAI L
Sbjct: 47 GSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVAIIL 85
>At5g65910.1 68418.m08296 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 432
Score = 31.1 bits (67), Expect = 0.69
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = -1
Query: 250 NPMQGGPATGDDHPCARLQTQIMS---IEARSTGDGSGVCSGRLFCVQVDGDDKSVKTQY 80
NP++ D HP + QI+ IE RST S S R VQVD +D +
Sbjct: 289 NPVESSDVETDKHPIESKEIQIVDKSVIEERSTSTAS---SSRFINVQVDDEDDDDADDW 345
Query: 79 FSENKNKNHS 50
++ + + S
Sbjct: 346 LNDEETSSVS 355
>At5g37620.1 68418.m04531 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 652
Score = 30.7 bits (66), Expect = 0.91
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 234 PPCIGFRAPF-HSCILHLFPARFHISPDRCSLVAAAAPHLET*ICIFLLKTFC 389
PP +G +P H LHL P R H + + C + +P+ C F++ C
Sbjct: 237 PPPVGVESPTTHEHQLHLVPRRIHFTCNACGTLGEQSPYF-CLQCNFMIHRQC 288
>At5g17500.1 68418.m02053 glycosyl hydrolase family 5 protein /
cellulase family protein predicted protein F3F19.15 -
Arabidopsis thaliana, EMBL:AC007357
Length = 526
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = -1
Query: 262 KGARNPMQGGPATGDDHPCARLQTQIMSIEARSTGDGSGVCSGRLFCVQVDGDDKSV 92
+G ++ ++G A G R+ T+I I A G L C+ VD D+ V
Sbjct: 447 RGHKSCLEGETAVGKSVKLGRICTKIEQISATKMHLSFNTSDGSLVCLDVDSDNNVV 503
>At2g41300.1 68415.m05100 strictosidine synthase family protein
similar to strictosidine synthase [Rauvolfia
serpentina][SP|P15324]; contains strictosidine synthase
domain PF03088; protein alignments support a CG
non-consensus donor splice site.
Length = 394
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = -1
Query: 277 NIQEWKGARNPMQGGPATGDDHPCARLQTQIMSIEARSTGDGSGVCSGRLFCVQVDGDDK 98
+I W G ++ P +D+P +R T ++ R G GV GR+ ++ G+D
Sbjct: 51 SIHHWTGEYRGLEKRPNHSEDNPPSRGWTGEPGLDPRGEGPYVGVTDGRI--LKWSGEDL 108
Query: 97 SVKTQYFSENKNKNHS 50
+S KN S
Sbjct: 109 GWIEFAYSSPHRKNCS 124
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 87 VFTDLSSPSTCTQNKRPEHTPLPSP 161
+F L++ + C N P+H P+PSP
Sbjct: 18 IFFTLTAATDCGCNPSPKHKPVPSP 42
>At2g31040.1 68415.m03786 ATP synthase protein I -related contains
weaks similarity to Swiss-Prot:P08443 ATP synthase
protein I [Synechococcus sp.]
Length = 350
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +2
Query: 2 GDAGV-RGTAQQPRLFVGMILILIF 73
G GV +G A QPRL V ++L++IF
Sbjct: 267 GARGVAKGAANQPRLLVPVVLVMIF 291
>At5g67340.1 68418.m08492 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 707
Score = 27.9 bits (59), Expect = 6.4
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +2
Query: 74 AEVL-GLYGLIVAIYLYXXXXXXXXXXXVARAPSLYAHYLSLKTRTGMVVAGSGSTLHRV 250
AE L GL L ++ Y R PS + LSL+ T V+ SG T RV
Sbjct: 209 AEYLDGLISLTTQMHEYLSDIKQAQLRCPVRVPSDFRCSLSLELMTDPVIVASGQTFERV 268
>At1g59640.2 68414.m06708 basic helix-loop-helix (bHLH) family
protein
Length = 343
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 293 SFSHISRPVQPCCCGCSASRDVNLYIFTKN 382
SF H ++ C C CS ++ IF++N
Sbjct: 259 SFKHCNKRSDLCFCSCSPKTELKTTIFSQN 288
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,962,433
Number of Sequences: 28952
Number of extensions: 303549
Number of successful extensions: 808
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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