Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30381
         (655 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015ADF81 Cluster: hypothetical protein NEMVEDRAFT_...    34   3.4  
UniRef50_UPI000023D923 Cluster: predicted protein; n=1; Gibberel...    33   7.9  

>UniRef50_UPI00015ADF81 Cluster: hypothetical protein
           NEMVEDRAFT_v1g225652; n=1; Nematostella vectensis|Rep:
           hypothetical protein NEMVEDRAFT_v1g225652 - Nematostella
           vectensis
          Length = 266

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 19/64 (29%), Positives = 35/64 (54%)
 Frame = +1

Query: 49  INFRKFIGIFWTNFRYIYISFFCIVCYLVIVEHCFKKQ*NMIDEQYYDYI*WNTYIHIR* 228
           I++ ++I I +T + +I  + +  + Y   + H    Q N ID   Y++I +  YIHI  
Sbjct: 47  IDYTQYIHIDYTQYNHIDYTQYIHIDYTQYI-HIDYTQYNHIDYTQYNHIDYTQYIHIDY 105

Query: 229 TRYV 240
           T+Y+
Sbjct: 106 TQYI 109


>UniRef50_UPI000023D923 Cluster: predicted protein; n=1; Gibberella
           zeae PH-1|Rep: predicted protein - Gibberella zeae PH-1
          Length = 770

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2

Query: 173 LMNNIMTTYNGTHTYILDRLGMSNITLNHT 262
           L NN++TTYNG H  +  RL     T+N T
Sbjct: 150 LENNVLTTYNGNHGDLQSRLSSIQQTINST 179


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,984,222
Number of Sequences: 1657284
Number of extensions: 9000425
Number of successful extensions: 14816
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14800
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)