Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30371
         (646 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    28   0.057
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    24   0.93 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    24   0.93 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   2.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   5.0  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   6.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.6  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 28.3 bits (60), Expect = 0.057
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 169 TAVRRCSYRFSASKRWQPRDTRSARWQHRI 80
           T    C ++FS+S  W P     A+  HRI
Sbjct: 72  TLAHHCRFKFSSSVGWSPAGHEEAQSPHRI 101


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -3

Query: 95  LATPYNRIVDLGMSICPLAWVIVSMISIF 9
           +AT     V + M +CP+ W++  ++ I+
Sbjct: 276 VATGKASFVTVPMIVCPIVWLMDEVVEIY 304


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -3

Query: 95  LATPYNRIVDLGMSICPLAWVIVSMISIF 9
           +AT     V + M +CP+ W++  ++ I+
Sbjct: 276 VATGKASFVTVPMIVCPIVWLMDEVVEIY 304


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 451 FYKQCFEFDL*LRNRKAVVNFE 386
           F  +  EFD+ L+N   ++N+E
Sbjct: 105 FINKLIEFDVKLQNVSLIINYE 126


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 537 LRFFTTSLRKHLTFLKGLIFET 602
           L FF  SLR  L F KG + ++
Sbjct: 70  LTFFNVSLRIILVFSKGKVIKS 91


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 12  NRNHRHNNPGERANRH 59
           + N  HNN G  +N H
Sbjct: 372 SNNRWHNNNGNNSNNH 387


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -1

Query: 151  SYRF-SASKRWQPRDTRSARWQHRITVSSILE 59
            SYR  S +  WQ + T S   +   TVS +++
Sbjct: 1173 SYRPPSTTNHWQTKTTTSTTTRPTTTVSQLID 1204


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,278
Number of Sequences: 336
Number of extensions: 3188
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)