Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30371
         (646 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0309 + 3417602-3418147                                           30   1.8  
02_02_0146 - 7171656-7172044,7172383-7175008                           29   3.2  
10_07_0138 + 13325418-13325954                                         28   5.5  
03_01_0457 - 3506709-3506717,3507386-3507484,3507701-3508034,350...    28   5.5  
12_02_0065 - 13109652-13110746,13110843-13111762,13139462-131395...    27   9.7  
09_02_0070 - 3844270-3846228                                           27   9.7  
01_06_1048 + 34108360-34109895                                         27   9.7  

>10_01_0309 + 3417602-3418147
          Length = 181

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 151 CNAGQLCLPNGSGGRSCLNGDANYLP 228
           C  G +   NG+GG S L+G A + P
Sbjct: 76  CQGGDITAGNGTGGESALDGAARHFP 101


>02_02_0146 - 7171656-7172044,7172383-7175008
          Length = 1004

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 232 AKVNSWRHRSDNSFPHFHWVGTA 164
           A  +SW  RS NSF +  WVG A
Sbjct: 43  AAFSSWEVRSSNSFGYCDWVGVA 65


>10_07_0138 + 13325418-13325954
          Length = 178

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = -1

Query: 160 RRCSYRFSASKRWQPRDTRSAR--WQHR 83
           RRCS R+  S+RW+ R +R  R  W+ R
Sbjct: 85  RRCSRRWRRSRRWRSRCSRRWRRSWRRR 112


>03_01_0457 -
           3506709-3506717,3507386-3507484,3507701-3508034,
           3508241-3508443,3508519-3508632,3508707-3508817,
           3508907-3509016,3509132-3509241,3509450-3509628,
           3509746-3509907,3509996-3510114,3510336-3510423,
           3510520-3510625,3510769-3510857,3511211-3511354,
           3511459-3511518,3511534-3511656,3511745-3511811,
           3511941-3512053,3512140-3512235,3512651-3512818
          Length = 867

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +1

Query: 22  IDTITQARGQIDIPRSTIRLYGVANAPSECPGAANVCSQRNGNCNAG 162
           +D  +  +GQI I   +I  Y  A A  +C G     S R   C AG
Sbjct: 667 LDMGSMGKGQIWINGQSIGRYWTAYAEGDCKGCHYTGSYRAPKCQAG 713


>12_02_0065 -
           13109652-13110746,13110843-13111762,13139462-13139528,
           13139607-13139675,13139877-13140020,13140100-13140171,
           13140316-13140387,13140466-13140558,13140655-13140726,
           13140809-13140925
          Length = 906

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = -1

Query: 220 SWRHRSDNSFPHFHWVGTAVRRCSYRFSASKRWQPRDTRSAR 95
           SWR    +S P      TA RRC      + R   RD R AR
Sbjct: 20  SWRTPPRSSTPSRRSYLTATRRCDLEGREADRRSARDARHAR 61


>09_02_0070 - 3844270-3846228
          Length = 652

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 19  IIDTITQARGQIDIPRSTIRLYGVANAPSECPGAANVCSQ 138
           ++D +    G + +PR    L  V NAP +  G  + C+Q
Sbjct: 598 VLDMLEGNSGLLSVPRKKPLLVFVPNAPIDLEGIVSECNQ 637


>01_06_1048 + 34108360-34109895
          Length = 511

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -3

Query: 200 QLLPPLPLGRHSCPALQLPFLCEQTLAAPGHSLGALATPYNRIVDLGMSIC 48
           +L PP+P   HSC   +  FL + T A  G  +   A    R+ D+  + C
Sbjct: 375 RLYPPVPFDTHSCK--EEEFLPDGTFAGKGWLVTYCAYAMGRVEDIWGADC 423


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,647,887
Number of Sequences: 37544
Number of extensions: 311575
Number of successful extensions: 767
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)