Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30371
(646 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82245-1|CAA57709.1| 1246|Homo sapiens nidogen protein. 44 6e-04
M30269-1|AAA59932.1| 1247|Homo sapiens nidogen protein. 44 6e-04
M27445-1|AAA57261.1| 581|Homo sapiens nidogen protein. 44 6e-04
BC045606-1|AAH45606.1| 1114|Homo sapiens NID1 protein protein. 44 6e-04
AL139161-2|CAI23422.1| 1247|Homo sapiens nidogen 1 protein. 44 6e-04
AL139161-1|CAI23421.1| 1114|Homo sapiens nidogen 1 protein. 44 6e-04
AL122018-2|CAI22681.1| 1247|Homo sapiens nidogen 1 protein. 44 6e-04
AL122018-1|CAI22680.1| 1114|Homo sapiens nidogen 1 protein. 44 6e-04
AB209448-1|BAD92685.1| 1241|Homo sapiens nidogen (enactin) varia... 44 6e-04
X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related prec... 32 1.5
DQ314873-1|ABC40732.1| 4544|Homo sapiens low density lipoprotein... 32 1.5
AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-re... 32 1.5
AF283374-1|AAL38108.1| 1731|Homo sapiens candidate tumor suppres... 31 2.7
AF176832-1|AAF70379.1| 4599|Homo sapiens low density lipoprotein... 31 2.7
AC108036-1|AAX93208.1| 449|Homo sapiens unknown protein. 31 2.7
AC117947-1|AAX88968.1| 346|Homo sapiens unknown protein. 31 4.6
AC110087-1|AAY24167.1| 132|Homo sapiens unknown protein. 31 4.6
U21092-1|AAC50112.1| 568|Homo sapiens CD40 receptor associated ... 30 8.1
U19260-1|AAA65732.1| 568|Homo sapiens LMP1 associated protein p... 30 8.1
U15637-1|AAA56753.1| 567|Homo sapiens CD40 binding protein prot... 30 8.1
L38509-1|AAA68195.1| 543|Homo sapiens CD40-associated protein p... 30 8.1
BC075087-1|AAH75087.1| 568|Homo sapiens TNF receptor-associated... 30 8.1
BC075086-1|AAH75086.1| 568|Homo sapiens TNF receptor-associated... 30 8.1
>X82245-1|CAA57709.1| 1246|Homo sapiens nidogen protein.
Length = 1246
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = +1
Query: 61 PRSTIRLYGVANAPSECPGAANVCSQRNGNCNAGQLCLPNGSGGRSC 201
P RLYG+ A S+CP N CS NG C LCL G R+C
Sbjct: 1188 PHKQTRLYGITTALSQCPQGHNYCSVNNGGCT--HLCLAT-PGSRTC 1231
>M30269-1|AAA59932.1| 1247|Homo sapiens nidogen protein.
Length = 1247
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = +1
Query: 61 PRSTIRLYGVANAPSECPGAANVCSQRNGNCNAGQLCLPNGSGGRSC 201
P RLYG+ A S+CP N CS NG C LCL G R+C
Sbjct: 1189 PHKQTRLYGITTALSQCPQGHNYCSVNNGGCT--HLCLAT-PGSRTC 1232
>M27445-1|AAA57261.1| 581|Homo sapiens nidogen protein.
Length = 581
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = +1
Query: 61 PRSTIRLYGVANAPSECPGAANVCSQRNGNCNAGQLCLPNGSGGRSC 201
P RLYG+ A S+CP N CS NG C LCL G R+C
Sbjct: 523 PHKQTRLYGITTALSQCPQGHNYCSVNNGGCT--HLCLAT-PGSRTC 566
>BC045606-1|AAH45606.1| 1114|Homo sapiens NID1 protein protein.
Length = 1114
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = +1
Query: 61 PRSTIRLYGVANAPSECPGAANVCSQRNGNCNAGQLCLPNGSGGRSC 201
P RLYG+ A S+CP N CS NG C LCL G R+C
Sbjct: 1056 PHKQTRLYGITTALSQCPQGHNYCSVNNGGCT--HLCLAT-PGSRTC 1099
>AL139161-2|CAI23422.1| 1247|Homo sapiens nidogen 1 protein.
Length = 1247
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = +1
Query: 61 PRSTIRLYGVANAPSECPGAANVCSQRNGNCNAGQLCLPNGSGGRSC 201
P RLYG+ A S+CP N CS NG C LCL G R+C
Sbjct: 1189 PHKQTRLYGITTALSQCPQGHNYCSVNNGGCT--HLCLAT-PGSRTC 1232
>AL139161-1|CAI23421.1| 1114|Homo sapiens nidogen 1 protein.
Length = 1114
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = +1
Query: 61 PRSTIRLYGVANAPSECPGAANVCSQRNGNCNAGQLCLPNGSGGRSC 201
P RLYG+ A S+CP N CS NG C LCL G R+C
Sbjct: 1056 PHKQTRLYGITTALSQCPQGHNYCSVNNGGCT--HLCLAT-PGSRTC 1099
>AL122018-2|CAI22681.1| 1247|Homo sapiens nidogen 1 protein.
Length = 1247
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = +1
Query: 61 PRSTIRLYGVANAPSECPGAANVCSQRNGNCNAGQLCLPNGSGGRSC 201
P RLYG+ A S+CP N CS NG C LCL G R+C
Sbjct: 1189 PHKQTRLYGITTALSQCPQGHNYCSVNNGGCT--HLCLAT-PGSRTC 1232
>AL122018-1|CAI22680.1| 1114|Homo sapiens nidogen 1 protein.
Length = 1114
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = +1
Query: 61 PRSTIRLYGVANAPSECPGAANVCSQRNGNCNAGQLCLPNGSGGRSC 201
P RLYG+ A S+CP N CS NG C LCL G R+C
Sbjct: 1056 PHKQTRLYGITTALSQCPQGHNYCSVNNGGCT--HLCLAT-PGSRTC 1099
>AB209448-1|BAD92685.1| 1241|Homo sapiens nidogen (enactin) variant
protein.
Length = 1241
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = +1
Query: 61 PRSTIRLYGVANAPSECPGAANVCSQRNGNCNAGQLCLPNGSGGRSC 201
P RLYG+ A S+CP N CS NG C LCL G R+C
Sbjct: 1183 PHKQTRLYGITTALSQCPQGHNYCSVNNGGCT--HLCLAT-PGSRTC 1226
>X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related precursor
(AA -19 to 4525) protein.
Length = 4544
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 124 NVCSQRNGNCNAGQLCLPNGSGGRSCL 204
N CS NG+C+ QLCLP RSC+
Sbjct: 1848 NPCSVNNGDCS--QLCLPTSETTRSCM 1872
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 124 NVCSQRNGNCNAGQLCLPNGSGGRSC 201
NVC+ NG C QLCL G G R+C
Sbjct: 2157 NVCAVANGGCQ--QLCLYRGRGQRAC 2180
>DQ314873-1|ABC40732.1| 4544|Homo sapiens low density
lipoprotein-related protein 1 (alpha-2-macroglobulin
receptor) protein.
Length = 4544
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 124 NVCSQRNGNCNAGQLCLPNGSGGRSCL 204
N CS NG+C+ QLCLP RSC+
Sbjct: 1848 NPCSVNNGDCS--QLCLPTSETTRSCM 1872
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 124 NVCSQRNGNCNAGQLCLPNGSGGRSC 201
NVC+ NG C QLCL G G R+C
Sbjct: 2157 NVCAVANGGCQ--QLCLYRGRGQRAC 2180
>AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-related
protein protein.
Length = 4544
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 124 NVCSQRNGNCNAGQLCLPNGSGGRSCL 204
N CS NG+C+ QLCLP RSC+
Sbjct: 1848 NPCSVNNGDCS--QLCLPTSETTRSCM 1872
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 124 NVCSQRNGNCNAGQLCLPNGSGGRSC 201
NVC+ NG C QLCL G G R+C
Sbjct: 2157 NVCAVANGGCQ--QLCLYRGRGQRAC 2180
>AF283374-1|AAL38108.1| 1731|Homo sapiens candidate tumor suppressor
protein protein.
Length = 1731
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 55 DIPRSTIRLYGVANAPSECPGAANVCSQRNGNCNAGQLCLPNGSGGRSCLNGD 213
DIP + + VAN + C + C+ NG C+ L PNG SC GD
Sbjct: 1521 DIPHQPMGIIAVANDTNSCE--LSPCALLNGGCHDLCLLTPNGRVNCSC-RGD 1570
Score = 30.7 bits (66), Expect = 4.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 106 ECPGAANVCSQRNGNCNAGQLCLPNGSGGRSCLNGDANYL 225
E +N C NG C+ QLCLP R+C+ YL
Sbjct: 906 EAQQGSNSCQLNNGGCS--QLCLPTSETTRTCMCTVGYYL 943
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 124 NVCSQRNGNCNAGQLCLPNGSGGRSC 201
NVC++ NG C QLCL G+ R+C
Sbjct: 1221 NVCARDNGGCK--QLCLYRGNSRRTC 1244
>AF176832-1|AAF70379.1| 4599|Homo sapiens low density lipoprotein
receptor related protein-deleted in tumor protein.
Length = 4599
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 55 DIPRSTIRLYGVANAPSECPGAANVCSQRNGNCNAGQLCLPNGSGGRSCLNGD 213
DIP + + VAN + C + C+ NG C+ L PNG SC GD
Sbjct: 2445 DIPHQPMGIIAVANDTNSCE--LSPCALLNGGCHDLCLLTPNGRVNCSC-RGD 2494
Score = 30.7 bits (66), Expect = 4.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 106 ECPGAANVCSQRNGNCNAGQLCLPNGSGGRSCLNGDANYL 225
E +N C NG C+ QLCLP R+C+ YL
Sbjct: 1830 EAQQGSNSCQLNNGGCS--QLCLPTSETTRTCMCTVGYYL 1867
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 124 NVCSQRNGNCNAGQLCLPNGSGGRSC 201
NVC++ NG C QLCL G+ R+C
Sbjct: 2145 NVCARDNGGCK--QLCLYRGNSRRTC 2168
>AC108036-1|AAX93208.1| 449|Homo sapiens unknown protein.
Length = 449
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +1
Query: 55 DIPRSTIRLYGVANAPSECPGAANVCSQRNGNCNAGQLCLPNGSGGRSCLNGD 213
DIP + + VAN + C + C+ NG C+ L PNG SC GD
Sbjct: 178 DIPHQPMGIIAVANDTNSCE--LSPCALLNGGCHDLCLLTPNGRVNCSC-RGD 227
>AC117947-1|AAX88968.1| 346|Homo sapiens unknown protein.
Length = 346
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 124 NVCSQRNGNCNAGQLCLPNGSGGRSC 201
NVC++ NG C QLCL G+ R+C
Sbjct: 225 NVCARDNGGCK--QLCLYRGNSRRTC 248
>AC110087-1|AAY24167.1| 132|Homo sapiens unknown protein.
Length = 132
Score = 30.7 bits (66), Expect = 4.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 106 ECPGAANVCSQRNGNCNAGQLCLPNGSGGRSCLNGDANYL 225
E +N C NG C+ QLCLP R+C+ YL
Sbjct: 43 EAQQGSNSCQLNNGGCS--QLCLPTSETTRTCMCTVGYYL 80
>U21092-1|AAC50112.1| 568|Homo sapiens CD40 receptor associated
factor 1 protein.
Length = 568
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -2
Query: 450 SISSVSNLICS--LEIEKQ*LILNNGQSTWITLLRVI 346
SI S+ N ICS +EIE+Q +L N +S + L RVI
Sbjct: 287 SIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVI 323
>U19260-1|AAA65732.1| 568|Homo sapiens LMP1 associated protein
protein.
Length = 568
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -2
Query: 450 SISSVSNLICS--LEIEKQ*LILNNGQSTWITLLRVI 346
SI S+ N ICS +EIE+Q +L N +S + L RVI
Sbjct: 287 SIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVI 323
>U15637-1|AAA56753.1| 567|Homo sapiens CD40 binding protein
protein.
Length = 567
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -2
Query: 450 SISSVSNLICS--LEIEKQ*LILNNGQSTWITLLRVI 346
SI S+ N ICS +EIE+Q +L N +S + L RVI
Sbjct: 286 SIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVI 322
>L38509-1|AAA68195.1| 543|Homo sapiens CD40-associated protein
protein.
Length = 543
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -2
Query: 450 SISSVSNLICS--LEIEKQ*LILNNGQSTWITLLRVI 346
SI S+ N ICS +EIE+Q +L N +S + L RVI
Sbjct: 262 SIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVI 298
>BC075087-1|AAH75087.1| 568|Homo sapiens TNF receptor-associated
factor 3 protein.
Length = 568
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -2
Query: 450 SISSVSNLICS--LEIEKQ*LILNNGQSTWITLLRVI 346
SI S+ N ICS +EIE+Q +L N +S + L RVI
Sbjct: 287 SIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVI 323
>BC075086-1|AAH75086.1| 568|Homo sapiens TNF receptor-associated
factor 3 protein.
Length = 568
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -2
Query: 450 SISSVSNLICS--LEIEKQ*LILNNGQSTWITLLRVI 346
SI S+ N ICS +EIE+Q +L N +S + L RVI
Sbjct: 287 SIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVI 323
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,157,896
Number of Sequences: 237096
Number of extensions: 1787282
Number of successful extensions: 7881
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 7607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7872
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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