Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30371
         (646 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1071|AAF58809.3| 1350|Drosophila melanogaster CG12908-P...    42   5e-04
AE013599-1070|AAS64880.1| 1370|Drosophila melanogaster CG12908-P...    42   5e-04
AF062404-1|AAD04331.2|  925|Drosophila melanogaster calpain prot...    29   4.1  
AE014296-1773|AAF50189.2|  925|Drosophila melanogaster CG8107-PA...    29   4.1  
AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc fin...    28   9.4  
AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB, ...    28   9.4  
AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA, ...    28   9.4  

>AE013599-1071|AAF58809.3| 1350|Drosophila melanogaster CG12908-PA,
            isoform A protein.
          Length = 1350

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +1

Query: 4    TLKIEIIDTITQARGQIDIPR-STIRLYGVANAPSECPGAANVCSQRNGNCNAGQLCLPN 180
            T K+EI+D++   +  I  P   + ++YG+      CP   + C   NG C   +LCL N
Sbjct: 1266 TKKVEIVDSLGARQTPIQPPFFGSHKMYGMTVVEQHCPQYQSPCQISNGGCTDSRLCLVN 1325

Query: 181  --GSGGRSC 201
                 G+SC
Sbjct: 1326 RQAPSGKSC 1334


>AE013599-1070|AAS64880.1| 1370|Drosophila melanogaster CG12908-PB,
            isoform B protein.
          Length = 1370

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +1

Query: 4    TLKIEIIDTITQARGQIDIPR-STIRLYGVANAPSECPGAANVCSQRNGNCNAGQLCLPN 180
            T K+EI+D++   +  I  P   + ++YG+      CP   + C   NG C   +LCL N
Sbjct: 1286 TKKVEIVDSLGARQTPIQPPFFGSHKMYGMTVVEQHCPQYQSPCQISNGGCTDSRLCLVN 1345

Query: 181  --GSGGRSC 201
                 G+SC
Sbjct: 1346 RQAPSGKSC 1354


>AF062404-1|AAD04331.2|  925|Drosophila melanogaster calpain
           protein.
          Length = 925

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -3

Query: 194 LPPLPLGRHSCPALQLPFLCEQTLAAPGHSLGALATPY 81
           L P P      P + +P+    T  AP H++G  A PY
Sbjct: 153 LAPYPSAMPGLPGMPMPYAPMPTSPAPQHNIGFPALPY 190


>AE014296-1773|AAF50189.2|  925|Drosophila melanogaster CG8107-PA
           protein.
          Length = 925

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -3

Query: 194 LPPLPLGRHSCPALQLPFLCEQTLAAPGHSLGALATPY 81
           L P P      P + +P+    T  AP H++G  A PY
Sbjct: 153 LAPYPSAMPGLPGMPMPYAPMPTSPAPQHNIGFPALPY 190


>AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc finger
            protein rhinoceros protein.
          Length = 3241

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +1

Query: 94   NAPSECPGAANVCSQRNGNCNAGQLCLPNGSGGRSCLNGDANYLP*LIKNNCQL 255
            N+ +  P A+   S  + +CN+  +   NGSGG    +G+   LP  +K +C++
Sbjct: 3191 NSNNSLPSASGTGSASSNSCNSNSI-NNNGSGGGRA-SGEGGLLP--LKKDCEV 3240


>AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB,
            isoform B protein.
          Length = 3241

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +1

Query: 94   NAPSECPGAANVCSQRNGNCNAGQLCLPNGSGGRSCLNGDANYLP*LIKNNCQL 255
            N+ +  P A+   S  + +CN+  +   NGSGG    +G+   LP  +K +C++
Sbjct: 3191 NSNNSLPSASGTGSASSNSCNSNSI-NNNGSGGGRA-SGEGGLLP--LKKDCEV 3240


>AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA,
            isoform A protein.
          Length = 3201

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +1

Query: 94   NAPSECPGAANVCSQRNGNCNAGQLCLPNGSGGRSCLNGDANYLP*LIKNNCQL 255
            N+ +  P A+   S  + +CN+  +   NGSGG    +G+   LP  +K +C++
Sbjct: 3151 NSNNSLPSASGTGSASSNSCNSNSI-NNNGSGGGRA-SGEGGLLP--LKKDCEV 3200


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,073,060
Number of Sequences: 53049
Number of extensions: 560589
Number of successful extensions: 1366
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1360
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)