Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30370
         (676 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075332-1|AAL68199.1|  217|Drosophila melanogaster GH11940p pro...   134   8e-32
AF017783-1|AAB97513.1|  217|Drosophila melanogaster alpha NAC pr...   134   8e-32
AE013599-1584|AAM68654.1|  217|Drosophila melanogaster CG8759-PC...   134   8e-32
AE013599-1583|AAF58457.1|  217|Drosophila melanogaster CG8759-PB...   134   8e-32
AE013599-1582|AAM68653.1|  217|Drosophila melanogaster CG8759-PA...   134   8e-32
Y08969-1|CAA70166.1|  217|Drosophila melanogaster Nascent polype...   132   3e-31
BT012499-1|AAS93770.1|  347|Drosophila melanogaster GH09281p pro...    83   3e-16
AY089219-1|AAL89957.1|  340|Drosophila melanogaster AT01837p pro...    83   3e-16
AE014134-190|AAF51428.2|  347|Drosophila melanogaster CG4415-PA ...    83   3e-16
AE014296-1811|AAF50161.3|  391|Drosophila melanogaster CG14157-P...    29   7.7  

>AY075332-1|AAL68199.1|  217|Drosophila melanogaster GH11940p
           protein.
          Length = 217

 Score =  134 bits (325), Expect = 8e-32
 Identities = 64/85 (75%), Positives = 71/85 (83%)
 Frame = +1

Query: 250 EEARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAKIEDLST 429
           ++ARKIM KLGLK +QGV RVTIRKSKNILFVIN+PDVYKNPHSDTYIVFGEAKIEDLS 
Sbjct: 74  KKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIEDLSQ 133

Query: 430 QATMAAAERFKAPETTATGNDASTT 504
           QA +AAAE+FKAPE     +    T
Sbjct: 134 QAQVAAAEKFKAPEAAGAADSVGAT 158



 Score = 36.7 bits (81), Expect = 0.029
 Identities = 30/80 (37%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
 Frame = +2

Query: 53  MPELTELDKATASMT------EKRKEETAXXXXXXXXNIPELEDAGAPDA---GGITNPI 205
           MPELTE+    A  T      E  + E           +P LE+A A      GG T   
Sbjct: 1   MPELTEIKSEAAPSTSAEAKPEDVRVEDDGSDSDSDGGMPGLEEAVAATTQLGGGATG-- 58

Query: 206 AGIDIVSKSKQSRGEKRPER 265
             ID+VSK+KQSRGEK+  +
Sbjct: 59  LPIDLVSKAKQSRGEKKARK 78



 Score = 33.5 bits (73), Expect = 0.27
 Identities = 13/21 (61%), Positives = 20/21 (95%)
 Frame = +3

Query: 585 IVMSQANVSRAKAVRALKNNH 647
           +V++QAN +RAKA++ALKNN+
Sbjct: 184 LVITQANTTRAKAIKALKNNN 204


>AF017783-1|AAB97513.1|  217|Drosophila melanogaster alpha NAC
           protein.
          Length = 217

 Score =  134 bits (325), Expect = 8e-32
 Identities = 64/85 (75%), Positives = 71/85 (83%)
 Frame = +1

Query: 250 EEARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAKIEDLST 429
           ++ARKIM KLGLK +QGV RVTIRKSKNILFVIN+PDVYKNPHSDTYIVFGEAKIEDLS 
Sbjct: 74  KKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIEDLSQ 133

Query: 430 QATMAAAERFKAPETTATGNDASTT 504
           QA +AAAE+FKAPE     +    T
Sbjct: 134 QAQVAAAEKFKAPEAAGAADSVGAT 158



 Score = 36.7 bits (81), Expect = 0.029
 Identities = 30/80 (37%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
 Frame = +2

Query: 53  MPELTELDKATASMT------EKRKEETAXXXXXXXXNIPELEDAGAPDA---GGITNPI 205
           MPELTE+    A  T      E  + E           +P LE+A A      GG T   
Sbjct: 1   MPELTEIKSEAAPSTSAEAKPEDVRVEDDGSDSDSDGGMPGLEEAVAATTQLGGGATG-- 58

Query: 206 AGIDIVSKSKQSRGEKRPER 265
             ID+VSK+KQSRGEK+  +
Sbjct: 59  LPIDLVSKAKQSRGEKKARK 78



 Score = 33.5 bits (73), Expect = 0.27
 Identities = 13/21 (61%), Positives = 20/21 (95%)
 Frame = +3

Query: 585 IVMSQANVSRAKAVRALKNNH 647
           +V++QAN +RAKA++ALKNN+
Sbjct: 184 LVITQANTTRAKAIKALKNNN 204


>AE013599-1584|AAM68654.1|  217|Drosophila melanogaster CG8759-PC,
           isoform C protein.
          Length = 217

 Score =  134 bits (325), Expect = 8e-32
 Identities = 64/85 (75%), Positives = 71/85 (83%)
 Frame = +1

Query: 250 EEARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAKIEDLST 429
           ++ARKIM KLGLK +QGV RVTIRKSKNILFVIN+PDVYKNPHSDTYIVFGEAKIEDLS 
Sbjct: 74  KKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIEDLSQ 133

Query: 430 QATMAAAERFKAPETTATGNDASTT 504
           QA +AAAE+FKAPE     +    T
Sbjct: 134 QAQVAAAEKFKAPEAAGAADSVGAT 158



 Score = 36.7 bits (81), Expect = 0.029
 Identities = 30/80 (37%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
 Frame = +2

Query: 53  MPELTELDKATASMT------EKRKEETAXXXXXXXXNIPELEDAGAPDA---GGITNPI 205
           MPELTE+    A  T      E  + E           +P LE+A A      GG T   
Sbjct: 1   MPELTEIKSEAAPSTSAEAKPEDVRVEDDGSDSDSDGGMPGLEEAVAATTQLGGGATG-- 58

Query: 206 AGIDIVSKSKQSRGEKRPER 265
             ID+VSK+KQSRGEK+  +
Sbjct: 59  LPIDLVSKAKQSRGEKKARK 78



 Score = 33.5 bits (73), Expect = 0.27
 Identities = 13/21 (61%), Positives = 20/21 (95%)
 Frame = +3

Query: 585 IVMSQANVSRAKAVRALKNNH 647
           +V++QAN +RAKA++ALKNN+
Sbjct: 184 LVITQANTTRAKAIKALKNNN 204


>AE013599-1583|AAF58457.1|  217|Drosophila melanogaster CG8759-PB,
           isoform B protein.
          Length = 217

 Score =  134 bits (325), Expect = 8e-32
 Identities = 64/85 (75%), Positives = 71/85 (83%)
 Frame = +1

Query: 250 EEARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAKIEDLST 429
           ++ARKIM KLGLK +QGV RVTIRKSKNILFVIN+PDVYKNPHSDTYIVFGEAKIEDLS 
Sbjct: 74  KKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIEDLSQ 133

Query: 430 QATMAAAERFKAPETTATGNDASTT 504
           QA +AAAE+FKAPE     +    T
Sbjct: 134 QAQVAAAEKFKAPEAAGAADSVGAT 158



 Score = 36.7 bits (81), Expect = 0.029
 Identities = 30/80 (37%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
 Frame = +2

Query: 53  MPELTELDKATASMT------EKRKEETAXXXXXXXXNIPELEDAGAPDA---GGITNPI 205
           MPELTE+    A  T      E  + E           +P LE+A A      GG T   
Sbjct: 1   MPELTEIKSEAAPSTSAEAKPEDVRVEDDGSDSDSDGGMPGLEEAVAATTQLGGGATG-- 58

Query: 206 AGIDIVSKSKQSRGEKRPER 265
             ID+VSK+KQSRGEK+  +
Sbjct: 59  LPIDLVSKAKQSRGEKKARK 78



 Score = 33.5 bits (73), Expect = 0.27
 Identities = 13/21 (61%), Positives = 20/21 (95%)
 Frame = +3

Query: 585 IVMSQANVSRAKAVRALKNNH 647
           +V++QAN +RAKA++ALKNN+
Sbjct: 184 LVITQANTTRAKAIKALKNNN 204


>AE013599-1582|AAM68653.1|  217|Drosophila melanogaster CG8759-PA,
           isoform A protein.
          Length = 217

 Score =  134 bits (325), Expect = 8e-32
 Identities = 64/85 (75%), Positives = 71/85 (83%)
 Frame = +1

Query: 250 EEARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAKIEDLST 429
           ++ARKIM KLGLK +QGV RVTIRKSKNILFVIN+PDVYKNPHSDTYIVFGEAKIEDLS 
Sbjct: 74  KKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIEDLSQ 133

Query: 430 QATMAAAERFKAPETTATGNDASTT 504
           QA +AAAE+FKAPE     +    T
Sbjct: 134 QAQVAAAEKFKAPEAAGAADSVGAT 158



 Score = 36.7 bits (81), Expect = 0.029
 Identities = 30/80 (37%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
 Frame = +2

Query: 53  MPELTELDKATASMT------EKRKEETAXXXXXXXXNIPELEDAGAPDA---GGITNPI 205
           MPELTE+    A  T      E  + E           +P LE+A A      GG T   
Sbjct: 1   MPELTEIKSEAAPSTSAEAKPEDVRVEDDGSDSDSDGGMPGLEEAVAATTQLGGGATG-- 58

Query: 206 AGIDIVSKSKQSRGEKRPER 265
             ID+VSK+KQSRGEK+  +
Sbjct: 59  LPIDLVSKAKQSRGEKKARK 78



 Score = 33.5 bits (73), Expect = 0.27
 Identities = 13/21 (61%), Positives = 20/21 (95%)
 Frame = +3

Query: 585 IVMSQANVSRAKAVRALKNNH 647
           +V++QAN +RAKA++ALKNN+
Sbjct: 184 LVITQANTTRAKAIKALKNNN 204


>Y08969-1|CAA70166.1|  217|Drosophila melanogaster Nascent
           polypeptide associatedcomplex protein alpha subunit
           protein.
          Length = 217

 Score =  132 bits (320), Expect = 3e-31
 Identities = 63/85 (74%), Positives = 71/85 (83%)
 Frame = +1

Query: 250 EEARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAKIEDLST 429
           ++ARKIM KLGLK +QGV RVTIRKSKNILFVIN+P+VYKNPHSDTYIVFGEAKIEDLS 
Sbjct: 74  KKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPNVYKNPHSDTYIVFGEAKIEDLSQ 133

Query: 430 QATMAAAERFKAPETTATGNDASTT 504
           QA +AAAE+FKAPE     +    T
Sbjct: 134 QAQVAAAEKFKAPEAAGAADSVGAT 158



 Score = 35.5 bits (78), Expect = 0.067
 Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
 Frame = +2

Query: 53  MPELTELDKATASMT------EKRKEETAXXXXXXXXNIPELEDA--GAPDAGGITNPIA 208
           MPELTE+    A  T      E  + E           +P LE+A       GG    + 
Sbjct: 1   MPELTEIKSEAAPSTSAEAKPEDVRVEDDGSDSDSDGGMPGLEEAVPATTQLGGGATGLP 60

Query: 209 GIDIVSKSKQSRGEKRPER 265
            ID+VSK+KQSRGEK+  +
Sbjct: 61  -IDLVSKAKQSRGEKKARK 78



 Score = 33.1 bits (72), Expect = 0.36
 Identities = 13/20 (65%), Positives = 19/20 (95%)
 Frame = +3

Query: 585 IVMSQANVSRAKAVRALKNN 644
           +V++QAN +RAKA++ALKNN
Sbjct: 184 LVITQANTTRAKAIKALKNN 203


>BT012499-1|AAS93770.1|  347|Drosophila melanogaster GH09281p
           protein.
          Length = 347

 Score = 83.4 bits (197), Expect = 3e-16
 Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
 Frame = +1

Query: 253 EARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAKIEDLST- 429
           +AR+I+ KL LKP++ V RVT++K KNIL  I+ PDVY+  HS TYI FGE  +ED ST 
Sbjct: 194 KARRILMKLDLKPMENVARVTMKKGKNILLYIDQPDVYRVAHSSTYIFFGEICVEDTSTT 253

Query: 430 ----QATMAAAERFKAPETTATGNDASTTGR 510
               QA + AAERF+   T+  G   +  G+
Sbjct: 254 SVASQAAVKAAERFRG--TSPAGRQGNEDGK 282


>AY089219-1|AAL89957.1|  340|Drosophila melanogaster AT01837p
           protein.
          Length = 340

 Score = 83.4 bits (197), Expect = 3e-16
 Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
 Frame = +1

Query: 253 EARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAKIEDLST- 429
           +AR+I+ KL LKP++ V RVT++K KNIL  I+ PDVY+  HS TYI FGE  +ED ST 
Sbjct: 187 KARRILMKLDLKPMENVARVTMKKGKNILLYIDQPDVYRVAHSSTYIFFGEICVEDTSTT 246

Query: 430 ----QATMAAAERFKAPETTATGNDASTTGR 510
               QA + AAERF+   T+  G   +  G+
Sbjct: 247 SVASQAAVKAAERFRG--TSPAGRQGNEDGK 275


>AE014134-190|AAF51428.2|  347|Drosophila melanogaster CG4415-PA
           protein.
          Length = 347

 Score = 83.4 bits (197), Expect = 3e-16
 Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
 Frame = +1

Query: 253 EARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAKIEDLST- 429
           +AR+I+ KL LKP++ V RVT++K KNIL  I+ PDVY+  HS TYI FGE  +ED ST 
Sbjct: 194 KARRILMKLDLKPMENVARVTMKKGKNILLYIDQPDVYRVAHSSTYIFFGEICVEDTSTT 253

Query: 430 ----QATMAAAERFKAPETTATGNDASTTGR 510
               QA + AAERF+   T+  G   +  G+
Sbjct: 254 SVASQAAVKAAERFRG--TSPAGRQGNEDGK 282


>AE014296-1811|AAF50161.3|  391|Drosophila melanogaster CG14157-PA
           protein.
          Length = 391

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -3

Query: 368 LYTSGELMTKRMFFDFLIVTLSTPCTGLRPSLLIIFL 258
           LYT     TK+++   L V LST C GL  ++  IF+
Sbjct: 255 LYTRMLQTTKKIYSIVLFVQLSTTCVGLLCTISCIFM 291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,969,807
Number of Sequences: 53049
Number of extensions: 495733
Number of successful extensions: 1214
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)