Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30370
         (676 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024847-3|AAF60854.1|  195|Caenorhabditis elegans Hypothetical ...   104   5e-23
AC024847-2|AAO21415.1|  197|Caenorhabditis elegans Hypothetical ...   104   5e-23
Z81029-7|CAB02698.2|  366|Caenorhabditis elegans Hypothetical pr...    29   4.0  
U97003-6|AAB52273.1|  402|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z71186-4|CAA94916.1|  867|Caenorhabditis elegans Hypothetical pr...    28   5.3  
U29488-6|AAA68776.1|  161|Caenorhabditis elegans Inhibitor of ce...    28   5.3  
Z50109-1|CAA90433.3|  142|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AF098995-11|AAC67488.2|  415|Caenorhabditis elegans Hypothetical...    27   9.2  

>AC024847-3|AAF60854.1|  195|Caenorhabditis elegans Hypothetical
           protein Y65B4BR.5a protein.
          Length = 195

 Score =  104 bits (250), Expect = 5e-23
 Identities = 50/71 (70%), Positives = 58/71 (81%)
 Frame = +1

Query: 250 EEARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAKIEDLST 429
           ++ARK+ SKLGLK V GV RV IRKSKNILFVIN PDV+K+P SDTYI+FGEAKIEDL+ 
Sbjct: 60  KKARKLFSKLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDTYIIFGEAKIEDLTQ 119

Query: 430 QATMAAAERFK 462
            A M+A E  K
Sbjct: 120 HAQMSAIENLK 130



 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = +3

Query: 585 IVMSQANVSRAKAVRALK 638
           +V+SQAN +R KA+RALK
Sbjct: 163 LVISQANTTRNKAIRALK 180


>AC024847-2|AAO21415.1|  197|Caenorhabditis elegans Hypothetical
           protein Y65B4BR.5b protein.
          Length = 197

 Score =  104 bits (250), Expect = 5e-23
 Identities = 50/71 (70%), Positives = 58/71 (81%)
 Frame = +1

Query: 250 EEARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAKIEDLST 429
           ++ARK+ SKLGLK V GV RV IRKSKNILFVIN PDV+K+P SDTYI+FGEAKIEDL+ 
Sbjct: 60  KKARKLFSKLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDTYIIFGEAKIEDLTQ 119

Query: 430 QATMAAAERFK 462
            A M+A E  K
Sbjct: 120 HAQMSAIENLK 130



 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = +3

Query: 585 IVMSQANVSRAKAVRALK 638
           +V+SQAN +R KA+RALK
Sbjct: 165 LVISQANTTRNKAIRALK 182


>Z81029-7|CAB02698.2|  366|Caenorhabditis elegans Hypothetical
           protein C01A2.3 protein.
          Length = 366

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 650 QMVVLERSDCFRSRDVRLGHYYL 582
           Q ++LE+ D  RS+D+RLG  ++
Sbjct: 162 QQILLEQRDFLRSKDIRLGRQFM 184


>U97003-6|AAB52273.1|  402|Caenorhabditis elegans Hypothetical
           protein F47C10.8 protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 18/68 (26%), Positives = 32/68 (47%)
 Frame = +2

Query: 305 RE*QSENQRTFSLSSTRLMYTRILIQTPTLFLVKPRLKICPHRPPWLQLRDSRHQRPQPL 484
           R+    N    S ++ ++ + R++I+  T    K  + +     P LQ +  R ++   L
Sbjct: 74  RDASCHNYGVLSCNACKMFFRRVVIEQLTYHCKKWNMCLENSGQPILQCKACRFEKCLQL 133

Query: 485 AMTLPQLE 508
            MTL QLE
Sbjct: 134 GMTLGQLE 141


>Z71186-4|CAA94916.1|  867|Caenorhabditis elegans Hypothetical
           protein F23D12.5 protein.
          Length = 867

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = +1

Query: 250 EEARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAK 411
           +E   I S    K +  VER +I+K + +LF + + D  +NP     IV G+ K
Sbjct: 791 QENMLIRSAKNEKSIIPVERCSIQKCREVLFNMITLDNKQNPFCLNCIVKGKVK 844


>U29488-6|AAA68776.1|  161|Caenorhabditis elegans Inhibitor of cell
           death protein 1 protein.
          Length = 161

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +1

Query: 268 MSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEA 408
           + KL +  + G+E V + K    +   N+P V  +  ++T+ V G A
Sbjct: 50  LKKLSVTNIPGIEEVNMIKDDGTVIHFNNPKVQTSVPANTFSVTGSA 96


>Z50109-1|CAA90433.3|  142|Caenorhabditis elegans Hypothetical
           protein C09H10.1 protein.
          Length = 142

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 415 EDLSTQATMAAAERFKAPETTATGNDASTT 504
           ED ++Q T AAA   +AP  + +GN    T
Sbjct: 36  EDATSQVTAAAANPAQAPSASISGNSVQNT 65


>AF098995-11|AAC67488.2|  415|Caenorhabditis elegans Hypothetical
           protein F58E1.11 protein.
          Length = 415

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = -2

Query: 270 HYLSGLFSPRDCLDLLTMSMPAIGLV 193
           + L  LF  R C+++LT+S+ +IG++
Sbjct: 210 YILEKLFGGRSCINVLTLSIDSIGIL 235


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,105,985
Number of Sequences: 27780
Number of extensions: 243957
Number of successful extensions: 739
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)