Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30369
(582 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 67 1e-11
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 67 1e-11
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 42 4e-04
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 42 4e-04
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 35 0.037
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 35 0.037
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 32 0.34
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 32 0.34
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 31 0.45
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 31 0.79
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 31 0.79
Z92834-9|CAB07386.2| 192|Caenorhabditis elegans Hypothetical pr... 29 2.4
AC006608-11|AAF39761.1| 360|Caenorhabditis elegans Hypothetical... 29 2.4
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 3.2
U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF022983-3|AAB69942.2| 399|Caenorhabditis elegans Nuclear hormo... 29 3.2
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 28 4.2
AF003134-2|AAB54141.5| 691|Caenorhabditis elegans Hypothetical ... 28 4.2
AC024791-4|AAK95890.1| 1186|Caenorhabditis elegans Msh (muts hom... 28 4.2
AC024751-7|AAK21507.2| 1258|Caenorhabditis elegans Hypothetical ... 28 4.2
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z68298-1|CAA92598.2| 342|Caenorhabditis elegans Hypothetical pr... 27 7.4
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 27 7.4
AY126454-1|AAM95163.1| 555|Caenorhabditis elegans nesprin-like ... 27 7.4
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 27 7.4
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 27 7.4
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical... 27 9.7
AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical ... 27 9.7
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +2
Query: 305 DPCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRC 481
+PC C G+ C + + G+ C CI CP + D VC N N+T+ S C++YR+RC
Sbjct: 51 NPCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERC 110
Query: 482 LCLDNSDQC 508
LC S +C
Sbjct: 111 LCKRKSKEC 119
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +2
Query: 305 DPCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRC 481
+PC C G+ C + + G+ C CI CP + D VC N N+T+ S C++YR+RC
Sbjct: 51 NPCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERC 110
Query: 482 LCLDNSDQC 508
LC S +C
Sbjct: 111 LCKRKSKEC 119
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 317 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRC 481
K C C + E+ A C C DCP YE + + VC T+ S+C + + C
Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSAC 570
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 308 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 481
PC K+ C C + A C C C D R VC ET+ ++CE+ ++ C
Sbjct: 369 PCEKMECGFWGSCVVKPDRTAECECPNRCE---DVMRPVCATNGETFDNECEMKKKSC 423
Score = 30.7 bits (66), Expect = 0.79
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +2
Query: 305 DPCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 481
DPC C G+ C++ C C + C T + VC +T+ ++C + C
Sbjct: 294 DPCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNECFLKLAAC 349
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +2
Query: 326 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDN 496
C +VC + D C+ CP TD + VC + +T+ ++C + C+ N
Sbjct: 448 CKKPQVCVVV---DGKPKCV--CPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKN 499
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 317 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRC 481
K C C + E+ A C C DCP YE + + VC T+ S+C + + C
Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSAC 578
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 308 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 481
PC K+ C C + A C C C D R VC ET+ ++CE+ ++ C
Sbjct: 377 PCEKMECGFWGSCVVKPDRTAECECPNRCE---DVMRPVCATNGETFDNECEMKKKSC 431
Score = 30.7 bits (66), Expect = 0.79
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +2
Query: 305 DPCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 481
DPC C G+ C++ C C + C T + VC +T+ ++C + C
Sbjct: 302 DPCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNECFLKLAAC 357
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +2
Query: 326 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDN 496
C +VC + D C+ CP TD + VC + +T+ ++C + C+ N
Sbjct: 456 CKKPQVCVVV---DGKPKCV--CPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKN 507
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 35.1 bits (77), Expect = 0.037
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Frame = +3
Query: 255 STRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPDAWC 425
ST S +++ +T+ + A ST++ + +S++T T T S ++PT TP+
Sbjct: 312 STPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPEI-T 370
Query: 426 AQTSTKPGNRIAKY----TASDAYASTTLISAWSAIPPRS 533
+ S+ P N I Y T S + +T L S + P S
Sbjct: 371 STLSSLPDNAICSYLDETTTSTTFTTTMLTSTTTEEPSTS 410
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 324 TAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTK-PGNRIAKYTASDAYASTTL 500
+ + + +T T T VT++ TVPT + TST P + S + ST
Sbjct: 273 STSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTAS 332
Query: 501 ISAWS 515
S S
Sbjct: 333 TSTSS 337
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 35.1 bits (77), Expect = 0.037
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Frame = +3
Query: 255 STRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPDAWC 425
ST S +++ +T+ + A ST++ + +S++T T T S ++PT TP+
Sbjct: 312 STPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPEI-T 370
Query: 426 AQTSTKPGNRIAKY----TASDAYASTTLISAWSAIPPRS 533
+ S+ P N I Y T S + +T L S + P S
Sbjct: 371 STLSSLPDNAICSYLDETTTSTTFTTTMLTSTTTEEPSTS 410
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 324 TAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTK-PGNRIAKYTASDAYASTTL 500
+ + + +T T T VT++ TVPT + TST P + S + ST
Sbjct: 273 STSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTAS 332
Query: 501 ISAWS 515
S S
Sbjct: 333 TSTSS 337
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 31.9 bits (69), Expect = 0.34
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 401 ETDSRRMVCTNF-NETWQSDCEVYRQRCLCLDNSDQCVVRNTTTFKSSI 544
E+D +R C F ET D + +C CLD +C +N T+F S I
Sbjct: 656 ESDKQR--CAAFPEETCSDDSNLCPPKCSCLDRVVRCSNKNLTSFPSRI 702
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 31.9 bits (69), Expect = 0.34
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 401 ETDSRRMVCTNF-NETWQSDCEVYRQRCLCLDNSDQCVVRNTTTFKSSI 544
E+D +R C F ET D + +C CLD +C +N T+F S I
Sbjct: 656 ESDKQR--CAAFPEETCSDDSNLCPPKCSCLDRVVRCSNKNLTSFPSRI 702
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/46 (28%), Positives = 16/46 (34%)
Frame = +2
Query: 326 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCE 463
CS G C G+ MC C D Y S C + C+
Sbjct: 215 CSGGAACICGARGNCMCECATDFGYTLASDGKTCQRVRRRLKEKCK 260
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 30.7 bits (66), Expect = 0.79
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +2
Query: 326 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET--WQSDCEVYRQRC---LCL 490
C G E + HG + C K CP T+ +C + ++T QS+C + +C C+
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSECLEGQFKCGTGQCI 444
Query: 491 DNSDQC 508
+ S +C
Sbjct: 445 EESLKC 450
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 30.7 bits (66), Expect = 0.79
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +2
Query: 326 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET--WQSDCEVYRQRC---LCL 490
C G E + HG + C K CP T+ +C + ++T QS+C + +C C+
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSECLEGQFKCGTGQCI 444
Query: 491 DNSDQC 508
+ S +C
Sbjct: 445 EESLKC 450
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 30.7 bits (66), Expect = 0.79
Identities = 24/91 (26%), Positives = 38/91 (41%)
Frame = +3
Query: 174 EHIEHGMSESLDEKRYHEAEIARVNDLSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKS 353
E+I E+LD+ + + + +T+ MK+ +T T+ KST + KS
Sbjct: 123 ENISDAKWETLDDNGKNYFVCSYDSRWATKPTPSTMKSTPTTPTTI--KSTPTTPTTMKS 180
Query: 354 TNTETPCVTASRTVPTRQTPDAWCAQTSTKP 446
T T T ++ PT T T T P
Sbjct: 181 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTP 211
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +3
Query: 255 STRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQT 434
+T + MK T +T T+ KST + KST T T ++ PT T T
Sbjct: 264 TTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKST 321
Query: 435 STKP 446
T P
Sbjct: 322 PTTP 325
>Z92834-9|CAB07386.2| 192|Caenorhabditis elegans Hypothetical
protein F39B2.5 protein.
Length = 192
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +3
Query: 189 GMSESLDEKRYHEAEIARVNDLSTRSLMKR 278
G E L +R HEAE ARVN TR L KR
Sbjct: 102 GQQEMLHYRRGHEAEAARVN--LTRPLTKR 129
>AC006608-11|AAF39761.1| 360|Caenorhabditis elegans Hypothetical
protein C15F1.1 protein.
Length = 360
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -2
Query: 167 RDVPAAELLRRWTFSSRGADPAVPTPHTLASAVQMTAITRANAXRP 30
RD+P +L+R WT R A TL +Q R N P
Sbjct: 315 RDLPVHDLVREWTLLDRSTLQARLNMETLTHGMQEHTFIRYNKIEP 360
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 28.7 bits (61), Expect = 3.2
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +3
Query: 258 TRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTS 437
T+ +K K K+T T + S T P ++S T T TP T+
Sbjct: 423 TKHRVKSTKEPKTTIFTTTPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVP-VTSTT 481
Query: 438 TKPGNRIAKYTASDAYASTTLISAWSAIP 524
T+P YT S + ++TT + ++ P
Sbjct: 482 TEPTT--TTYTTSTSTSTTTTLPPTTSTP 508
>U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical
protein C05E11.7 protein.
Length = 463
Score = 28.7 bits (61), Expect = 3.2
Identities = 21/82 (25%), Positives = 36/82 (43%)
Frame = +2
Query: 314 LKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLD 493
L + S G + NE+G + +C K+C +SR ++C TW S+ + C D
Sbjct: 119 LSLPASTGCQLDDNEYGKQVISCKKEC----NSRGLIC--MMRTWISE----QNTCTMKD 168
Query: 494 NSDQCVVRNTTTFKSSITELAE 559
+C + F+ T + E
Sbjct: 169 IDQKCGAEAASLFQELQTTVFE 190
>AF022983-3|AAB69942.2| 399|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 270 protein.
Length = 399
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -2
Query: 158 PAAELLRRWTFSSRGAD--PAVPTPHTLASAVQMTAI 54
P +++ RRW +SRG P+ + H+L ++ M A+
Sbjct: 15 PLSKISRRWNLNSRGGAIVPSSTSVHSLGHSISMLAV 51
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +2
Query: 335 GRVCEINEHGDAM-CNCIKD-CPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDNSDQC 508
G +CE + + + C + D C + CTN T+ DC + C N D+C
Sbjct: 123 GYMCECADGYEGVHCQHLVDHCAKQPCHNNATCTNMGATYHCDCTLGFDGVHCEMNIDEC 182
>AF003134-2|AAB54141.5| 691|Caenorhabditis elegans Hypothetical
protein ZC581.3 protein.
Length = 691
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +3
Query: 207 DEKRYHEAEIARVNDLSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETP 371
D++ Y E VND+ S + T + T + +ST+++ +A+ST++ +P
Sbjct: 227 DDEDYEEELTTIVNDMEDDSSYTKTSTMPTEETTNSLESTSSESFTAESTSSISP 281
>AC024791-4|AAK95890.1| 1186|Caenorhabditis elegans Msh (muts
homolog) family protein 6 protein.
Length = 1186
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +3
Query: 153 RGDISEAEHIEHGMSESLDEKRYHEAEIARVNDLSTRSLMKRMKTKKST 299
RG + A EH S+ D+ H ++AR+ T +++ K T
Sbjct: 297 RGSYAHAGFPEHAASKFADQLMNHGYKVARIEQTETPQMLEERNQKTKT 345
>AC024751-7|AAK21507.2| 1258|Caenorhabditis elegans Hypothetical
protein Y18H1A.3 protein.
Length = 1258
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +3
Query: 318 KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDA 482
+ +A VS K + ++PC SRTV R D + KP + + +A
Sbjct: 876 RQSAIISVSRKDFHAKSPCEITSRTVVGRHIWDLDTHEDVRKPATNVTNWLRKEA 930
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/73 (24%), Positives = 28/73 (38%)
Frame = +3
Query: 321 STAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTL 500
ST +T T TP + T T ++P T T P + T + STT+
Sbjct: 384 STTTSTKKLTTTTTTTPKPSQKPTTTTTKSPVVITTTTKTSPKPTTSPSTTTSTTTSTTI 443
Query: 501 ISAWSAIPPRSNR 539
+ + P + R
Sbjct: 444 PPSTTTRKPANPR 456
>Z68298-1|CAA92598.2| 342|Caenorhabditis elegans Hypothetical
protein F44D12.2 protein.
Length = 342
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Frame = +2
Query: 308 PCLKVHCSAGRV----CEINEHGDAMCNCIKDCPY 400
P ++ C G V C +N HG+ MC C D Y
Sbjct: 59 PTIQKGCVIGEVAPEGCRVNHHGNVMCFC-SDADY 92
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -1
Query: 519 LRTTH*SELSRHKHRWRYTSQSDCQVSLKFVHTMRLESVS 400
L TT + ++RH +++ DC +++F+ + ESVS
Sbjct: 946 LATTSETSVNRHLQNLELSNEQDCPDAIEFLEEVGRESVS 985
>AY126454-1|AAM95163.1| 555|Caenorhabditis elegans nesprin-like
protein protein.
Length = 555
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -1
Query: 519 LRTTH*SELSRHKHRWRYTSQSDCQVSLKFVHTMRLESVS 400
L TT + ++RH +++ DC +++F+ + ESVS
Sbjct: 258 LATTSETSVNRHLQNLELSNEQDCPDAIEFLEEVGRESVS 297
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/48 (27%), Positives = 17/48 (35%)
Frame = +2
Query: 374 CNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDNSDQCVVR 517
C K+ E V + C QRC+ +DNS C R
Sbjct: 32 CQLCKNMTNEFVKEPYVWIELTNSVIDGCNAVSQRCIVVDNSTNCATR 79
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -1
Query: 519 LRTTH*SELSRHKHRWRYTSQSDCQVSLKFVHTMRLESVS 400
L TT + ++RH +++ DC +++F+ + ESVS
Sbjct: 946 LATTSETSVNRHLQNLELSNEQDCPDAIEFLEEVGRESVS 985
>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
protein Y47D3A.26 protein.
Length = 1205
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +3
Query: 141 EQLGRGDISEAEHIEHGMSESLDEKRYHEAEIARVNDLSTRSLMKRMKTKKS 296
E LGRG + E ++ ++ ++EK + EI +N+ +TR R + S
Sbjct: 279 ESLGRGLREDKETLQAEETKMVEEKMTLKLEIDSLNEENTRERQGRQNAEHS 330
>AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical
protein H34I24.2 protein.
Length = 458
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 305 DPCLKVHCSAGRVCEINEHGDAMC-NCIKDCPYETDSRRMVCT 430
+PCL +C+ C+++ C NC D T +++ C+
Sbjct: 267 NPCLAFNCTGSGPCQLDSLNRPYCTNCPGDMDGYTQCQQVACS 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,571,927
Number of Sequences: 27780
Number of extensions: 241459
Number of successful extensions: 1050
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -