Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30368
         (669 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071738-1|AAL49360.1|  304|Drosophila melanogaster RH45818p pro...    68   1e-11
AJ133736-1|CAB39319.1|  304|Drosophila melanogaster BM-40 protein.     68   1e-11
AE014297-4005|AAF56632.2|  304|Drosophila melanogaster CG6378-PA...    68   1e-11
AE014297-2619|AAF55629.2| 1542|Drosophila melanogaster CG6026-PA...    33   0.27 
BT030255-1|ABN49394.1|  424|Drosophila melanogaster IP18339p pro...    31   1.4  
BT030205-1|ABN49344.1|  424|Drosophila melanogaster IP18039p pro...    31   1.4  
BT001711-1|AAN71466.1|  182|Drosophila melanogaster RE67695p pro...    30   3.3  
AE014296-1719|AAN11954.1|  182|Drosophila melanogaster CG16707-P...    30   3.3  
AE014296-1718|AAN11953.1|  182|Drosophila melanogaster CG16707-P...    30   3.3  
AE014296-1717|AAN11952.1|  183|Drosophila melanogaster CG16707-P...    30   3.3  
AE014296-1716|AAF50218.1|  183|Drosophila melanogaster CG16707-P...    30   3.3  
BT025124-1|ABE73295.1|  510|Drosophila melanogaster IP09286p pro...    29   4.3  
AE014298-118|AAF45560.1|  276|Drosophila melanogaster CG14633-PA...    29   4.3  
AE014134-1505|AAO41167.1|  837|Drosophila melanogaster CG13388-P...    29   5.7  
AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA ...    28   10.0 

>AY071738-1|AAL49360.1|  304|Drosophila melanogaster RH45818p
           protein.
          Length = 304

 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 26/52 (50%), Positives = 37/52 (71%)
 Frame = +2

Query: 368 RVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRAYAST 523
           R+C++++     C CI +CP E D+RR+VCTN NETW SDC VY+QR +  +
Sbjct: 94  RICQMHDE-KPKCVCIPECPEEVDTRRLVCTNTNETWPSDCSVYQQRCWCDS 144



 Score = 45.6 bits (103), Expect = 6e-05
 Identities = 17/29 (58%), Positives = 20/29 (68%)
 Frame = +3

Query: 582 CREMPDCTESEMSDFPRRMRDWLFNIMRD 668
           C E   C   ++ DFPRRMRDWLF +MRD
Sbjct: 165 CHEPRSCEGEDLKDFPRRMRDWLFYVMRD 193


>AJ133736-1|CAB39319.1|  304|Drosophila melanogaster BM-40 protein.
          Length = 304

 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 26/52 (50%), Positives = 37/52 (71%)
 Frame = +2

Query: 368 RVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRAYAST 523
           R+C++++     C CI +CP E D+RR+VCTN NETW SDC VY+QR +  +
Sbjct: 94  RICQMHDE-KPKCVCIPECPEEVDTRRLVCTNTNETWPSDCSVYQQRCWCDS 144



 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = +3

Query: 582 CREMPDCTESEMSDFPRRMRDWLFNIMRD 668
           C E   C   ++ DFPRRMRDWLFN+MRD
Sbjct: 165 CHEPRSCEGEDLKDFPRRMRDWLFNVMRD 193


>AE014297-4005|AAF56632.2|  304|Drosophila melanogaster CG6378-PA
           protein.
          Length = 304

 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 26/52 (50%), Positives = 37/52 (71%)
 Frame = +2

Query: 368 RVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRAYAST 523
           R+C++++     C CI +CP E D+RR+VCTN NETW SDC VY+QR +  +
Sbjct: 94  RICQMHDE-KPKCVCIPECPEEVDTRRLVCTNTNETWPSDCSVYQQRCWCDS 144



 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = +3

Query: 582 CREMPDCTESEMSDFPRRMRDWLFNIMRD 668
           C E   C   ++ DFPRRMRDWLFN+MRD
Sbjct: 165 CHEPRSCEGEDLKDFPRRMRDWLFNVMRD 193


>AE014297-2619|AAF55629.2| 1542|Drosophila melanogaster CG6026-PA
           protein.
          Length = 1542

 Score = 33.5 bits (73), Expect = 0.27
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +3

Query: 381 STNTETPCVTASR-TVPTRQTPDAWCAQTSTKPGNRIAKYTASELMPRQL*SVPWSAIPP 557
           ST+T T   T +R T+P  + P      T+T P +  AKYT +   P  L +V  +  PP
Sbjct: 194 STSTTTTTTTTTRGTLPPSRKPVT--TTTTTAPTSPAAKYTTTSRRPIPLQTVSTTPQPP 251

Query: 558 RSN 566
           R++
Sbjct: 252 RTS 254


>BT030255-1|ABN49394.1|  424|Drosophila melanogaster IP18339p
           protein.
          Length = 424

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +3

Query: 360 SADVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASEL 512
           + D S   T TE P  +   TVP+   P+A+CA+  +K   R+   T  ++
Sbjct: 336 TTDSSTSPTTTE-PSTSVQTTVPSEIDPNAYCAKLKSKGYFRVETDTTCQM 385


>BT030205-1|ABN49344.1|  424|Drosophila melanogaster IP18039p
           protein.
          Length = 424

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +3

Query: 360 SADVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASEL 512
           + D S   T TE P  +   TVP+   P+A+CA+  +K   R+   T  ++
Sbjct: 336 TTDSSTSPTTTE-PSTSVQTTVPSEIDPNAYCAKLKSKGYFRVETDTTCQM 385


>BT001711-1|AAN71466.1|  182|Drosophila melanogaster RE67695p
           protein.
          Length = 182

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 378 KSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPG 479
           K+T + TP  T S T P   T     A T+T PG
Sbjct: 78  KTTTSTTPASTTSSTTPASTTSSTTPATTTTTPG 111


>AE014296-1719|AAN11954.1|  182|Drosophila melanogaster CG16707-PB,
           isoform B protein.
          Length = 182

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 378 KSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPG 479
           K+T + TP  T S T P   T     A T+T PG
Sbjct: 78  KTTTSTTPASTTSSTTPASTTSSTTPATTTTTPG 111


>AE014296-1718|AAN11953.1|  182|Drosophila melanogaster CG16707-PA,
           isoform A protein.
          Length = 182

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 378 KSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPG 479
           K+T + TP  T S T P   T     A T+T PG
Sbjct: 78  KTTTSTTPASTTSSTTPASTTSSTTPATTTTTPG 111


>AE014296-1717|AAN11952.1|  183|Drosophila melanogaster CG16707-PD,
           isoform D protein.
          Length = 183

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 378 KSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPG 479
           K+T + TP  T S T P   T     A T+T PG
Sbjct: 79  KTTTSTTPASTTSSTTPASTTSSTTPATTTTTPG 112


>AE014296-1716|AAF50218.1|  183|Drosophila melanogaster CG16707-PC,
           isoform C protein.
          Length = 183

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 378 KSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPG 479
           K+T + TP  T S T P   T     A T+T PG
Sbjct: 79  KTTTSTTPASTTSSTTPASTTSSTTPATTTTTPG 112


>BT025124-1|ABE73295.1|  510|Drosophila melanogaster IP09286p
           protein.
          Length = 510

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +1

Query: 484 GLRSIPPASLCLDNSDQCRGPQYHHVQIEYYGTAEKCLTALKARCLTSPVACGTGFLTSC 663
           G  S+ PA L   +  Q  G   HH+Q+ ++      L A+++  + S VA G G   +C
Sbjct: 117 GSGSLSPAYL--QHHLQHHGSPLHHLQVHHHTAPPSPLAAVRSAQMGSSVANGAGPAAAC 174


>AE014298-118|AAF45560.1|  276|Drosophila melanogaster CG14633-PA
           protein.
          Length = 276

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +1

Query: 484 GLRSIPPASLCLDNSDQCRGPQYHHVQIEYYGTAEKCLTALKARCLTSPVACGTGFLTSC 663
           G  S+ PA L   +  Q  G   HH+Q+ ++      L A+++  + S VA G G   +C
Sbjct: 117 GSGSLSPAYL--QHHLQHHGSPLHHLQVHHHTAPPSPLAAVRSAQMGSSVANGAGPAAAC 174


>AE014134-1505|AAO41167.1|  837|Drosophila melanogaster CG13388-PD,
           isoform D protein.
          Length = 837

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -1

Query: 192 VPAAELLRRWTFSSRGADPAVPTPHTLASAVQMTAITRANARRPFI 55
           V AAEL++  T  ++  +  +PT HT AS+  +  +T + A    +
Sbjct: 402 VAAAELVQTQTILTKTTNTILPTSHTQASSEVIETVTPSQAEEEVV 447


>AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA
            protein.
          Length = 3166

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +3

Query: 426  PTRQTPDAWCAQTSTKPGNRIAKYTASELMPRQL*SVPWSAIPPRSN 566
            PT   P      +S  P N++++YT +   P  + S+P    PP  N
Sbjct: 886  PTTAAPPTSAPASSAPPDNKLSQYTYTTTKPGDIFSLP-PTTPPTIN 931


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,082,698
Number of Sequences: 53049
Number of extensions: 610585
Number of successful extensions: 1893
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1893
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)