Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30365
         (615 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70750-14|CAC42268.1|  450|Caenorhabditis elegans Hypothetical p...    29   2.0  
CU457741-7|CAM36348.1|  710|Caenorhabditis elegans Hypothetical ...    28   6.1  
AC090999-2|AAK26145.1|  139|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z70750-14|CAC42268.1|  450|Caenorhabditis elegans Hypothetical
           protein C50F4.16 protein.
          Length = 450

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +1

Query: 148 DRVT*ASYDCKTIYLVEIC**CVKKN*LLSPNEYRSVKPLEVRGGRV 288
           D++  +SYD +T Y +E+C   + K   LSP E  S +  E  G RV
Sbjct: 84  DKIDWSSYDSETGYTIELCAGLIDKE-GLSPREIASEEVAEECGYRV 129


>CU457741-7|CAM36348.1|  710|Caenorhabditis elegans Hypothetical
           protein C42C1.7 protein.
          Length = 710

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = -2

Query: 572 YYFKRPQCYYML*VS-SLILLHQQLFAYIKKSYSRLIYISASVKINNLLTVIN*LSLGNR 396
           YY       Y+  +S SL L+H  ++AY K +Y   IY+    K   LL V   L+ G  
Sbjct: 320 YYLSNRVLTYIGDISYSLYLIHWPIYAYCKLTYPNNIYVE---KPAFLLLVSIVLTAGLL 376

Query: 395 INEITRTLVY 366
           ++ I    VY
Sbjct: 377 VSIIIAVAVY 386


>AC090999-2|AAK26145.1|  139|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.9 protein.
          Length = 139

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 213 TLLTNLY*INSLTIVTCLCDSVAVAASN 130
           T +TNLY I  L    C C S+A+  SN
Sbjct: 45  TTITNLYGICVLPTDRCACQSLAIQPSN 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,535,598
Number of Sequences: 27780
Number of extensions: 198937
Number of successful extensions: 303
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 303
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)