Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30364
         (553 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039037-6|AAC48230.2|  129|Caenorhabditis elegans Seven tm rece...    28   3.9  
Z81592-9|CAB63315.1|  945|Caenorhabditis elegans Hypothetical pr...    27   9.0  

>AF039037-6|AAC48230.2|  129|Caenorhabditis elegans Seven tm
           receptor protein 121 protein.
          Length = 129

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +1

Query: 10  RSLLVCWRRVLPD-HPASRPASRHQLH 87
           R  + CWRRVLP    +SRPA     H
Sbjct: 100 RDAVFCWRRVLPSMMSSSRPAKHTSSH 126


>Z81592-9|CAB63315.1|  945|Caenorhabditis elegans Hypothetical
           protein T16G1.9 protein.
          Length = 945

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 10/46 (21%), Positives = 23/46 (50%)
 Frame = +1

Query: 250 THGDNKSQHESRDGDAVHGEYTLVEADGSVRKVEYTADDHHGFNAI 387
           T+G     H   +G++V  + T + +DG+++++         F A+
Sbjct: 419 TNGHASGDHSHSNGNSVSKQLTDISSDGTIKELTIRDQPDRAFRAV 464


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,091,634
Number of Sequences: 27780
Number of extensions: 110603
Number of successful extensions: 443
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)