BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS30360 (598 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 126 1e-29 11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 126 1e-29 01_06_0083 + 26283492-26283756,26284255-26284467,26284620-262847... 27 8.6 >12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738, 3429821-3430230,3430323-3430556,3430934-3431378, 3432300-3432390,3433292-3433518,3433786-3433861, 3434009-3434134,3434221-3434384 Length = 757 Score = 126 bits (304), Expect = 1e-29 Identities = 57/102 (55%), Positives = 69/102 (67%) Frame = +2 Query: 236 EMGQRTLEXPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKXHKGLRKVACI 415 + G + E IPVD+VF +DEMID I +RW +LPRK H+GLRKVACI Sbjct: 196 DYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 255 Query: 416 GAWHPSRVSFTVARAGQXGYHHRTXMNKKIYVLDKESTKRMA 541 GAWHP+RVS+TVARAGQ GYHHRT MNKK+Y + K + A Sbjct: 256 GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHA 297 Score = 82.2 bits (194), Expect = 3e-16 Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 1/81 (1%) Frame = +3 Query: 3 RFYKNWYXXXXXXXXXXXXXWQDELGRKSIXKXFKKMIRYCSVVRVIAHTQMKLLK-QRQ 179 RFYKNW + + G+K I +KM +Y S+VRVIAHTQ++ +K +Q Sbjct: 117 RFYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQ 176 Query: 180 KKAHIMEIQLNGGTIEDKVKW 242 KKAH+MEIQ+NGGTI DKV + Sbjct: 177 KKAHLMEIQINGGTIADKVDY 197 >11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283, 3276406-3276815,3276942-3277200 Length = 389 Score = 126 bits (304), Expect = 1e-29 Identities = 57/102 (55%), Positives = 69/102 (67%) Frame = +2 Query: 236 EMGQRTLEXPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKXHKGLRKVACI 415 + G + E IPVD+VF +DEMID I +RW +LPRK H+GLRKVACI Sbjct: 196 DYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 255 Query: 416 GAWHPSRVSFTVARAGQXGYHHRTXMNKKIYVLDKESTKRMA 541 GAWHP+RVS+TVARAGQ GYHHRT MNKK+Y + K + A Sbjct: 256 GAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHA 297 Score = 81.0 bits (191), Expect = 7e-16 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%) Frame = +3 Query: 3 RFYKNWYXXXXXXXXXXXXXWQDELGRKSIXKXFKKMIRYCSVVRVIAHTQMKLLK-QRQ 179 RFYKNW + + G+K I +KM +Y SVVRVI HTQ++ +K +Q Sbjct: 117 RFYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASVVRVIVHTQIRKMKGLKQ 176 Query: 180 KKAHIMEIQLNGGTIEDKVKW 242 KKAH+MEIQ+NGGTI DKV + Sbjct: 177 KKAHLMEIQINGGTIADKVDY 197 >01_06_0083 + 26283492-26283756,26284255-26284467,26284620-26284771, 26284884-26285157,26285277-26285485 Length = 370 Score = 27.5 bits (58), Expect = 8.6 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +2 Query: 89 NRXXFQEDDPLL*CCKSHCPHSNEAVKTATKEGSHYGNP 205 N F +DPLL CC H P+ A T + + +G+P Sbjct: 297 NPRRFGINDPLLACCGGHGPYHTGA--TCDRTATVWGDP 333 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,163,277 Number of Sequences: 37544 Number of extensions: 280665 Number of successful extensions: 495 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 482 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 493 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1423789920 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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