Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30360
(598 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 136 2e-32
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 136 2e-32
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 136 2e-32
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 136 2e-32
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 136 2e-32
AE014134-3385|AAN11116.1| 381|Drosophila melanogaster CG31622-P... 28 8.4
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 136 bits (330), Expect = 2e-32
Identities = 62/85 (72%), Positives = 65/85 (76%)
Frame = +2
Query: 254 LEXPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKXHKGLRKVACIGAWHPS 433
LE PI V +VF QDEMIDC+ SRWHTKKLPRK HKGLRKVACIGAWHPS
Sbjct: 212 LEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPS 271
Query: 434 RVSFTVARAGQXGYHHRTXMNKKIY 508
RVS TVARAGQ GYHHRT +NKKIY
Sbjct: 272 RVSTTVARAGQKGYHHRTEINKKIY 296
Score = 129 bits (312), Expect = 2e-30
Identities = 55/84 (65%), Positives = 66/84 (78%)
Frame = +3
Query: 3 RFYKNWYXXXXXXXXXXXXXWQDELGRKSIXKXFKKMIRYCSVVRVIAHTQMKLLKQRQK 182
RFYKNWY W D+LG+KSI F+KM+RYC V+RVIAH+Q++L+KQRQK
Sbjct: 128 RFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQK 187
Query: 183 KAHIMEIQLNGGTIEDKVKWAREH 254
KAH+MEIQLNGG+IEDKVKWAREH
Sbjct: 188 KAHVMEIQLNGGSIEDKVKWAREH 211
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +1
Query: 511 IGQGIHKKDGKVIXXNASTEYDLSEKSIT 597
IG GIH KDGKVI NASTEYDL++KSIT
Sbjct: 298 IGAGIHTKDGKVIKNNASTEYDLTDKSIT 326
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 136 bits (330), Expect = 2e-32
Identities = 62/85 (72%), Positives = 65/85 (76%)
Frame = +2
Query: 254 LEXPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKXHKGLRKVACIGAWHPS 433
LE PI V +VF QDEMIDC+ SRWHTKKLPRK HKGLRKVACIGAWHPS
Sbjct: 201 LEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPS 260
Query: 434 RVSFTVARAGQXGYHHRTXMNKKIY 508
RVS TVARAGQ GYHHRT +NKKIY
Sbjct: 261 RVSTTVARAGQKGYHHRTEINKKIY 285
Score = 129 bits (312), Expect = 2e-30
Identities = 55/84 (65%), Positives = 66/84 (78%)
Frame = +3
Query: 3 RFYKNWYXXXXXXXXXXXXXWQDELGRKSIXKXFKKMIRYCSVVRVIAHTQMKLLKQRQK 182
RFYKNWY W D+LG+KSI F+KM+RYC V+RVIAH+Q++L+KQRQK
Sbjct: 117 RFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQK 176
Query: 183 KAHIMEIQLNGGTIEDKVKWAREH 254
KAH+MEIQLNGG+IEDKVKWAREH
Sbjct: 177 KAHVMEIQLNGGSIEDKVKWAREH 200
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +1
Query: 511 IGQGIHKKDGKVIXXNASTEYDLSEKSIT 597
IG GIH KDGKVI NASTEYDL++KSIT
Sbjct: 287 IGAGIHTKDGKVIKNNASTEYDLTDKSIT 315
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 136 bits (330), Expect = 2e-32
Identities = 62/85 (72%), Positives = 65/85 (76%)
Frame = +2
Query: 254 LEXPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKXHKGLRKVACIGAWHPS 433
LE PI V +VF QDEMIDC+ SRWHTKKLPRK HKGLRKVACIGAWHPS
Sbjct: 188 LEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPS 247
Query: 434 RVSFTVARAGQXGYHHRTXMNKKIY 508
RVS TVARAGQ GYHHRT +NKKIY
Sbjct: 248 RVSTTVARAGQKGYHHRTEINKKIY 272
Score = 129 bits (312), Expect = 2e-30
Identities = 55/84 (65%), Positives = 66/84 (78%)
Frame = +3
Query: 3 RFYKNWYXXXXXXXXXXXXXWQDELGRKSIXKXFKKMIRYCSVVRVIAHTQMKLLKQRQK 182
RFYKNWY W D+LG+KSI F+KM+RYC V+RVIAH+Q++L+KQRQK
Sbjct: 104 RFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQK 163
Query: 183 KAHIMEIQLNGGTIEDKVKWAREH 254
KAH+MEIQLNGG+IEDKVKWAREH
Sbjct: 164 KAHVMEIQLNGGSIEDKVKWAREH 187
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +1
Query: 511 IGQGIHKKDGKVIXXNASTEYDLSEKSIT 597
IG GIH KDGKVI NASTEYDL++KSIT
Sbjct: 274 IGAGIHTKDGKVIKNNASTEYDLTDKSIT 302
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 136 bits (330), Expect = 2e-32
Identities = 62/85 (72%), Positives = 65/85 (76%)
Frame = +2
Query: 254 LEXPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKXHKGLRKVACIGAWHPS 433
LE PI V +VF QDEMIDC+ SRWHTKKLPRK HKGLRKVACIGAWHPS
Sbjct: 188 LEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPS 247
Query: 434 RVSFTVARAGQXGYHHRTXMNKKIY 508
RVS TVARAGQ GYHHRT +NKKIY
Sbjct: 248 RVSTTVARAGQKGYHHRTEINKKIY 272
Score = 129 bits (312), Expect = 2e-30
Identities = 55/84 (65%), Positives = 66/84 (78%)
Frame = +3
Query: 3 RFYKNWYXXXXXXXXXXXXXWQDELGRKSIXKXFKKMIRYCSVVRVIAHTQMKLLKQRQK 182
RFYKNWY W D+LG+KSI F+KM+RYC V+RVIAH+Q++L+KQRQK
Sbjct: 104 RFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQK 163
Query: 183 KAHIMEIQLNGGTIEDKVKWAREH 254
KAH+MEIQLNGG+IEDKVKWAREH
Sbjct: 164 KAHVMEIQLNGGSIEDKVKWAREH 187
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +1
Query: 511 IGQGIHKKDGKVIXXNASTEYDLSEKSIT 597
IG GIH KDGKVI NASTEYDL++KSIT
Sbjct: 274 IGAGIHTKDGKVIKNNASTEYDLTDKSIT 302
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 136 bits (330), Expect = 2e-32
Identities = 62/85 (72%), Positives = 65/85 (76%)
Frame = +2
Query: 254 LEXPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKXHKGLRKVACIGAWHPS 433
LE PI V +VF QDEMIDC+ SRWHTKKLPRK HKGLRKVACIGAWHPS
Sbjct: 201 LEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPS 260
Query: 434 RVSFTVARAGQXGYHHRTXMNKKIY 508
RVS TVARAGQ GYHHRT +NKKIY
Sbjct: 261 RVSTTVARAGQKGYHHRTEINKKIY 285
Score = 129 bits (312), Expect = 2e-30
Identities = 55/84 (65%), Positives = 66/84 (78%)
Frame = +3
Query: 3 RFYKNWYXXXXXXXXXXXXXWQDELGRKSIXKXFKKMIRYCSVVRVIAHTQMKLLKQRQK 182
RFYKNWY W D+LG+KSI F+KM+RYC V+RVIAH+Q++L+KQRQK
Sbjct: 117 RFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQK 176
Query: 183 KAHIMEIQLNGGTIEDKVKWAREH 254
KAH+MEIQLNGG+IEDKVKWAREH
Sbjct: 177 KAHVMEIQLNGGSIEDKVKWAREH 200
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +1
Query: 511 IGQGIHKKDGKVIXXNASTEYDLSEKSIT 597
IG GIH KDGKVI NASTEYDL++KSIT
Sbjct: 287 IGAGIHTKDGKVIKNNASTEYDLTDKSIT 315
>AE014134-3385|AAN11116.1| 381|Drosophila melanogaster CG31622-PD,
isoform D protein.
Length = 381
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 114 IRYCSVVRVIAHTQMKLLKQR--QKKAHIMEIQLNGGTIEDKVKWAREHWRXLSLSILCL 287
IR CS+V ++ +TQ+ + + R I+ G+ ++ ++A ++ LSL I+C+
Sbjct: 85 IRSCSIVTMLIYTQLYIQRFRFVALLQSILRFNQISGSHREEGRFAFYYYTHLSLLIICM 144
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,840,351
Number of Sequences: 53049
Number of extensions: 465066
Number of successful extensions: 719
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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