Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30357
         (652 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8GPE9 Cluster: Eps4K; n=2; Streptococcus|Rep: Eps4K - ...    34   2.6  
UniRef50_Q0CBQ2 Cluster: Predicted protein; n=1; Aspergillus ter...    33   7.8  
UniRef50_P16495 Cluster: Nucleocapsid protein; n=23; Orthobunyav...    33   7.8  

>UniRef50_Q8GPE9 Cluster: Eps4K; n=2; Streptococcus|Rep: Eps4K -
           Streptococcus thermophilus
          Length = 384

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = -2

Query: 123 LQADGVXSLENIWGKRRRFWKANAAVNPVKRFIVKSLGLSA 1
           L AD   +L  I GK  RF++ N  +NP+ RF+ K L +SA
Sbjct: 227 LYADKYVTLRKIKGKLSRFFEKNFGINPL-RFVTKKLKVSA 266


>UniRef50_Q0CBQ2 Cluster: Predicted protein; n=1; Aspergillus
           terreus NIH2624|Rep: Predicted protein - Aspergillus
           terreus (strain NIH 2624)
          Length = 710

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 250 LPWNS*LKPVRLRTRKANVWRRFCREITPS*TLSGLCSPIR 372
           +PWN     V  R   A++W  + R IT S T++ LC PI+
Sbjct: 399 IPWNH--NRVATRRDLASIWATYHRHITISNTINFLCGPIK 437


>UniRef50_P16495 Cluster: Nucleocapsid protein; n=23;
           Orthobunyavirus|Rep: Nucleocapsid protein - Bunyamwera
           virus
          Length = 233

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +1

Query: 115 GLEWDNAVELKCRLYLSAVSGAEHFLKIFGVYPLVCALKKYQMKKL 252
           G+ W++  E+    YLS   G+E FL  F  YPL   + K Q K++
Sbjct: 131 GITWNDGEEV----YLSFFPGSEMFLGTFRFYPLAIGIYKVQRKEM 172


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,714,798
Number of Sequences: 1657284
Number of extensions: 12991286
Number of successful extensions: 29283
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29254
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)