Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30357
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.0  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   5.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   6.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.8  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 90  YFQAXSRHRPGVGQRGRIKMPLIL 161
           YF   + +RPG+G+  +  +P+ L
Sbjct: 27  YFSNWAIYRPGIGRYAQEDLPVDL 50


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +3

Query: 345 IVWTMFPDTGSNNLSAILMNAPAEL 419
           I W   P   ++NL+ + + AP+++
Sbjct: 490 IEWPQVPKNATDNLTYLRIGAPSDV 514


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 198 IRGLPSRLRFKEIPNEKTTLELVIKAGKIKNEKGER 305
           I  L   L+F+ I +   T EL++   + K E+ E+
Sbjct: 365 ISRLVETLKFQSITSAVVTYELIVIQFRKKMERDEK 400


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 489  FLYDNTHLHSYFICN 533
            F+ D+T+   Y++CN
Sbjct: 2242 FVADDTNCAQYYLCN 2256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,882
Number of Sequences: 336
Number of extensions: 3216
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)