Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30357
         (652 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83307-7|CAM13057.1|  531|Homo sapiens elongation protein 4 homo...    32   1.5  
Z83307-6|CAM13056.1|  424|Homo sapiens elongation protein 4 homo...    32   1.5  
Z83001-1|CAM28371.1|  531|Homo sapiens elongation protein 4 homo...    32   1.5  
BC012514-1|AAH12514.1|  535|Homo sapiens ELP4 protein protein.         32   1.5  
AK000505-1|BAA91212.1|  424|Homo sapiens protein ( Homo sapiens ...    32   1.5  
BC030643-1|AAH30643.1|  265|Homo sapiens Williams-Beuren syndrom...    31   4.7  
AY372053-1|AAQ74835.1|  265|Homo sapiens WBSCR28 isoform A protein.    31   4.7  

>Z83307-7|CAM13057.1|  531|Homo sapiens elongation protein 4 homolog
           (S. cerevisiae) protein.
          Length = 531

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 200 NILRKCSAPLTADKYKRHFNSTALSHSRPMA*XRLKIS 87
           NIL++  APL  DK K+ F+    +H  P +  ++KI+
Sbjct: 124 NILQELPAPLLDDKCKKEFDEDVYNHKTPESNIKMKIA 161


>Z83307-6|CAM13056.1|  424|Homo sapiens elongation protein 4 homolog
           (S. cerevisiae) protein.
          Length = 424

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 200 NILRKCSAPLTADKYKRHFNSTALSHSRPMA*XRLKIS 87
           NIL++  APL  DK K+ F+    +H  P +  ++KI+
Sbjct: 124 NILQELPAPLLDDKCKKEFDEDVYNHKTPESNIKMKIA 161


>Z83001-1|CAM28371.1|  531|Homo sapiens elongation protein 4 homolog
           (S. cerevisiae) protein.
          Length = 531

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 200 NILRKCSAPLTADKYKRHFNSTALSHSRPMA*XRLKIS 87
           NIL++  APL  DK K+ F+    +H  P +  ++KI+
Sbjct: 124 NILQELPAPLLDDKCKKEFDEDVYNHKTPESNIKMKIA 161


>BC012514-1|AAH12514.1|  535|Homo sapiens ELP4 protein protein.
          Length = 535

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 200 NILRKCSAPLTADKYKRHFNSTALSHSRPMA*XRLKIS 87
           NIL++  APL  DK K+ F+    +H  P +  ++KI+
Sbjct: 124 NILQELPAPLLDDKCKKEFDEDVYNHKTPESNIKMKIA 161


>AK000505-1|BAA91212.1|  424|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20498 fis, clone KAT08960. ).
          Length = 424

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 200 NILRKCSAPLTADKYKRHFNSTALSHSRPMA*XRLKIS 87
           NIL++  APL  DK K+ F+    +H  P +  ++KI+
Sbjct: 124 NILQELPAPLLDDKCKKEFDEDVYNHKTPESNIKMKIA 161


>BC030643-1|AAH30643.1|  265|Homo sapiens Williams-Beuren syndrome
           chromosome region 28 protein.
          Length = 265

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 338 LGVISLQNRRHTFAFLVLNLTGFNHEFQG 252
           L V+ +QNR H + FL+L +  FNH   G
Sbjct: 21  LSVLLVQNRDHLYNFLLLKINLFNHWVSG 49


>AY372053-1|AAQ74835.1|  265|Homo sapiens WBSCR28 isoform A protein.
          Length = 265

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 338 LGVISLQNRRHTFAFLVLNLTGFNHEFQG 252
           L V+ +QNR H + FL+L +  FNH   G
Sbjct: 21  LSVLLVQNRDHLYNFLLLKINLFNHWVSG 49


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,573,046
Number of Sequences: 237096
Number of extensions: 1890180
Number of successful extensions: 2964
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2963
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)