Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30357
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81586-6|CAB04697.2|  393|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U29244-11|AAC71092.1|  201|Caenorhabditis elegans Hypothetical p...    29   2.9  
Z74028-1|CAA98424.1|  334|Caenorhabditis elegans Hypothetical pr...    28   5.0  
U49830-16|AAK31480.1|  392|Caenorhabditis elegans Hypothetical p...    28   5.0  

>Z81586-6|CAB04697.2|  393|Caenorhabditis elegans Hypothetical
           protein T05F1.8 protein.
          Length = 393

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 88  DIFKRXHAIGLEWDNAVELKCRLYLSAVSGAEHFLKIF 201
           ++FK  +++ L  +NA   +  +YL+A + AE F  IF
Sbjct: 126 EVFKNIYSLSLGEENAYIWRTSIYLAASASAEFFADIF 163


>U29244-11|AAC71092.1|  201|Caenorhabditis elegans Hypothetical
           protein ZK1248.11 protein.
          Length = 201

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/26 (61%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 231 EIPNEKTTLELVIKAGKI-KNEKGER 305
           E+PNEK   EL  KA K  KN KGER
Sbjct: 79  EVPNEKALEELYEKAKKTHKNVKGER 104


>Z74028-1|CAA98424.1|  334|Caenorhabditis elegans Hypothetical
           protein C14C10.1 protein.
          Length = 334

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 88  DIFKRXHAIGLEWDNAVELKCRLYLSAVSGAEHFLKIF 201
           +IFK  +   L  +NA   +  +YL+A S AE F   F
Sbjct: 112 EIFKNVYGSMLSEENAYTYRSWVYLAAASSAEFFADFF 149


>U49830-16|AAK31480.1|  392|Caenorhabditis elegans Hypothetical
           protein C33F10.12 protein.
          Length = 392

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 88  DIFKRXHAIGLEWDNAVELKCRLYLSAVSGAEHFLKIF 201
           ++FK  ++  L  +NA   +  +YL+A + AE F  IF
Sbjct: 126 EVFKNIYSSALGEENAYIWRTSIYLAASASAEFFADIF 163


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,682,951
Number of Sequences: 27780
Number of extensions: 306247
Number of successful extensions: 661
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)