Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30352
(453 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 25 0.44
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 23 1.3
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 23 1.3
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 21 4.1
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 21 4.1
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 21 4.1
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 21 4.1
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 4.1
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 4.1
AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory recept... 21 4.1
AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory recept... 21 4.1
AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory recept... 21 4.1
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 7.1
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 7.1
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 7.1
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 7.1
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 7.1
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 7.1
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 7.1
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 20 9.4
DQ855506-1|ABH88193.1| 124|Tribolium castaneum chemosensory pro... 20 9.4
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 20 9.4
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 24.6 bits (51), Expect = 0.44
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 174 GTSRFYCSAGC*FFTPNCGRSDRRHLTSCTLRCDGTGLSRR 52
G ++ Y S ++ PN R+ ++ L SC L C T S R
Sbjct: 144 GATKVYNSMKREYYWPNMYRTIKKRLRSCDL-CQKTKSSNR 183
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 23.0 bits (47), Expect = 1.3
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = +1
Query: 76 TPKSATRKVTSVASTTVGSKKLTSSTTVKPASTSKKVTEKQS 201
TP+ + T T + SSTT KP +T + +S
Sbjct: 398 TPEPQPTQTTESEPTQASEQPTESSTTQKPQTTKTPESGNES 439
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 23.0 bits (47), Expect = 1.3
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +1
Query: 46 LKPTTQSSSITPKSATRKVTSVASTTVGSKK----LTSSTTVKPASTSKKVTEKQS 201
+KPT+Q I P + ++ A + K +T++TT+ SKKVT S
Sbjct: 1249 VKPTSQK--IVPNLRNQNLSHQAKNLDSNLKYEFWVTAATTIGEGQPSKKVTVSPS 1302
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 21.4 bits (43), Expect = 4.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 79 PKSATRKVTSVASTTVGSKKLTSSTT 156
P+S ++ T S+ S KL +STT
Sbjct: 36 PQSPNQQYTKDCSSPTPSDKLNTSTT 61
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 21.4 bits (43), Expect = 4.1
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +2
Query: 188 LKNSLLPR-R*RWTFLLRRNRKELKNTANVWHNSWCVVLCIC 310
++N PR R R+ ++ R K N W + +CV + C
Sbjct: 280 IRNIRGPRKRLRFAYVTRTGANIKKLIVNTWISLFCVKVTNC 321
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 21.4 bits (43), Expect = 4.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = -2
Query: 251 PFDFFATK---TSTVIFLVKDCFSVTFLLVLAGFTVVLDVN 138
P F TK ST IFLV + +L++ TV+++VN
Sbjct: 90 PIVIFKTKDMRNSTNIFLVNLSVADLMVLLVCTPTVLVEVN 130
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 21.4 bits (43), Expect = 4.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = -2
Query: 251 PFDFFATK---TSTVIFLVKDCFSVTFLLVLAGFTVVLDVN 138
P F TK ST IFLV + +L++ TV+++VN
Sbjct: 90 PIVIFKTKDMRNSTNIFLVNLSVADLMVLLVCTPTVLVEVN 130
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 4.1
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 13 SSPSQKQTTKVLKPTTQSSSITPKSATRKVTSVASTTVGSKKLTSSTTVKPASTS 177
+SP T+ KP T S T ++ + +S +ST+ K T++ K + +S
Sbjct: 144 TSPLSVSTSPPGKPAT---STTSQNLSSPASSTSSTSSTEKAGTNNNNSKSSQSS 195
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 4.1
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 231 CCEEIERSSKTLXTSGIIVGVLFCVF 308
C RSSK L II+ VLF F
Sbjct: 31 CTRSNFRSSKLLILYNIILQVLFVSF 56
>AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory receptor
candidate 13 protein.
Length = 390
Score = 21.4 bits (43), Expect = 4.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 172 TSKKVTEKQSFTKKMTVDVF 231
T V EK+ + K+T+D F
Sbjct: 255 TLTTVVEKECYKMKVTIDAF 274
>AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory receptor
candidate 12 protein.
Length = 316
Score = 21.4 bits (43), Expect = 4.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 172 TSKKVTEKQSFTKKMTVDVF 231
T V EK+ + K+T+D F
Sbjct: 181 TLTTVVEKECYKMKVTIDAF 200
>AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory receptor
candidate 3 protein.
Length = 398
Score = 21.4 bits (43), Expect = 4.1
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 231 CCEEIERSSKTLXTSGIIVGVLFCVF 308
C RSSK L II+ VLF F
Sbjct: 49 CTRSNFRSSKLLILYNIILQVLFVSF 74
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.6 bits (41), Expect = 7.1
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 13 SSPSQKQTTKVLKPTTQSSSITPKSATRKVTSVAST 120
+SP T+ KP T ++S S +S +ST
Sbjct: 144 TSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSST 179
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 20.6 bits (41), Expect = 7.1
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 13 SSPSQKQTTKVLKPTTQSSSITPKSATRKVTSVAST 120
+SP T+ KP T ++S S +S +ST
Sbjct: 144 TSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSST 179
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.6 bits (41), Expect = 7.1
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 13 SSPSQKQTTKVLKPTTQSSSITPKSATRKVTSVAST 120
+SP T+ KP T ++S S +S +ST
Sbjct: 144 TSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSST 179
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 20.6 bits (41), Expect = 7.1
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 13 SSPSQKQTTKVLKPTTQSSSITPKSATRKVTSVAST 120
+SP T+ KP T ++S S +S +ST
Sbjct: 144 TSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSST 179
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 20.6 bits (41), Expect = 7.1
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 13 SSPSQKQTTKVLKPTTQSSSITPKSATRKVTSVAST 120
+SP T+ KP T ++S S +S +ST
Sbjct: 100 TSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSST 135
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 20.6 bits (41), Expect = 7.1
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 13 SSPSQKQTTKVLKPTTQSSSITPKSATRKVTSVAST 120
+SP T+ KP T ++S S +S +ST
Sbjct: 144 TSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSST 179
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 20.6 bits (41), Expect = 7.1
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 13 SSPSQKQTTKVLKPTTQSSSITPKSATRKVTSVAST 120
+SP T+ KP T ++S S +S +ST
Sbjct: 144 TSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSST 179
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 20.2 bits (40), Expect = 9.4
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -1
Query: 321 IRPTQIHKTTHQLLCQTXAVFL 256
+RP HK TH++ FL
Sbjct: 286 LRPGLTHKYTHEIKLHDKTPFL 307
>DQ855506-1|ABH88193.1| 124|Tribolium castaneum chemosensory
protein 20 protein.
Length = 124
Score = 20.2 bits (40), Expect = 9.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 390 DPEVRYLSAHMDD 428
DPE Y+ AH D+
Sbjct: 108 DPEHTYVKAHEDE 120
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 20.2 bits (40), Expect = 9.4
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 246 ERSSKTLXTSGIIVGVLFCV 305
E S+ + G+ +GVL+C+
Sbjct: 44 ELGSQWIPDLGVPIGVLYCM 63
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,039
Number of Sequences: 336
Number of extensions: 2205
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -