Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30352
(453 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0768 - 19396146-19396607,19397855-19398175,19398424-193995... 32 0.19
06_01_0916 + 7058991-7059050,7060057-7061235,7061778-7063481,706... 31 0.57
02_04_0591 - 24159654-24160155,24160233-24160316,24160898-241609... 30 0.76
06_03_0270 + 19009412-19009888,19009936-19011048,19011810-190118... 30 1.0
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411 29 2.3
11_06_0692 + 26327487-26328509 28 3.1
05_07_0267 + 28818396-28818513,28819292-28819697,28819796-288199... 28 3.1
02_05_0769 + 31616644-31616875,31616980-31617203,31617308-316174... 28 3.1
06_03_1365 + 29598130-29598523,29599016-29599078,29599292-29599398 28 4.0
01_06_0948 - 33242219-33242530,33242632-33242782,33242874-332431... 28 4.0
11_06_0249 + 21697863-21697923,21698119-21698128,21698160-216987... 27 5.3
10_08_0198 + 15688142-15690427,15690524-15690607,15691232-156913... 27 5.3
06_03_1248 + 28685911-28687719 27 7.1
04_04_0292 + 24181486-24181515,24181729-24182616,24182702-241828... 27 7.1
04_03_0090 - 11037111-11037568,11039606-11039671,11040524-110407... 27 7.1
04_01_0022 + 324422-324445,324870-325265,325366-325546,325781-32... 27 7.1
01_03_0050 + 11959421-11959736,11959892-11959960,11960641-119609... 27 7.1
08_01_0842 - 8252232-8253155 27 9.3
01_01_0139 + 1263356-1264273 27 9.3
>04_03_0768 - 19396146-19396607,19397855-19398175,19398424-19399569,
19400073-19400855,19402114-19402149
Length = 915
Score = 32.3 bits (70), Expect = 0.19
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 10 SSSPSQKQTTKVLKPTTQSSSITPKSATRKVTSVASTTVG--SKKLTSSTTVKPASTS 177
++SP ++ K + + + + S T+ + S +STTVG S + SSTT KP S S
Sbjct: 832 TASPGSTNHSRFQKTSIPARASSFSSQTQNMPSESSTTVGKMSSTVKSSTTAKPHSES 889
>06_01_0916 +
7058991-7059050,7060057-7061235,7061778-7063481,
7063557-7064432,7064457-7064660,7065039-7065143,
7065407-7065496,7066066-7066176,7066349-7066780
Length = 1586
Score = 30.7 bits (66), Expect = 0.57
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 22 SQKQTTKVLKPTTQSSSITPKSATRKVTSVASTTVGSKKLTSSTTVKPASTSKKVT-EKQ 198
++KQ + SSS ++ K+T+ AS TVGS L + VK + T KK+ E+Q
Sbjct: 442 ARKQAGITTESFASSSSGEVSGSSSKLTT-ASATVGSISLKVESQVKLSDTEKKIAGERQ 500
Query: 199 S 201
S
Sbjct: 501 S 501
>02_04_0591 -
24159654-24160155,24160233-24160316,24160898-24160944,
24161035-24161103,24161259-24161310,24161693-24161775,
24162312-24162422,24162808-24163211,24163308-24163380,
24163460-24163510,24163882-24164073,24164176-24164302,
24164753-24164934,24165023-24165226,24165738-24165836
Length = 759
Score = 30.3 bits (65), Expect = 0.76
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +1
Query: 25 QKQTTKVLKPTTQSSSITPKSATRKVTSVASTTVGSKKLTSSTTVKPASTSKKVTEKQSF 204
++ T K + QSS KS+TRK + S+ K+ S K + SK+ T K
Sbjct: 386 EETTDSTGKLSKQSSKDDSKSSTRKASGAGSS---KKQQKISLKQKDETDSKEDTAKDLS 442
Query: 205 TKKMTVDVFVAK---KSKGAQ 258
K+M V+K K+KG+Q
Sbjct: 443 LKEMVSPKSVSKGSAKTKGSQ 463
>06_03_0270 +
19009412-19009888,19009936-19011048,19011810-19011899,
19011928-19012027,19012135-19012333,19012559-19012679
Length = 699
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +1
Query: 7 RSSSPSQKQTTKVLKPTTQS----SSITPKSATRKVTSVASTTVGSKKLTSSTTVKPAST 174
RS PS++ T P+T S SS TP +A ++ S+T G + ++ + ST
Sbjct: 69 RSVPPSRRSPTPSSSPSTASAAARSSRTPSAAPGGTSARGSSTPGGRSGRGTSPARAPST 128
Query: 175 SKKVTEKQSFTK 210
S T + T+
Sbjct: 129 SAPSTSPTATTR 140
>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
Length = 885
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 392 VIRDLTSQPSNDQHAAVTSPSHHGSDQRKYTKQHTNY 282
V+++L S +ND + TS S H + Y QH+NY
Sbjct: 553 VLQELISALTNDTN---TSDSQHSNYSNAYNSQHSNY 586
>11_06_0692 + 26327487-26328509
Length = 340
Score = 28.3 bits (60), Expect = 3.1
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +1
Query: 7 RSSSPSQK-QTTKVLKPTTQSSSITPKSATRKVTSVASTTVGSKKLTSSTTVKPASTSKK 183
RS S +K ++ + ++ S P++A +V +VA+ +SST +STS +
Sbjct: 152 RSRSVRRKARSMSPFRTRWRAPSPAPETA-EEVEAVATPAASRSSSSSSTASSASSTSSR 210
Query: 184 VTEKQSFTKKMTVDVFVAKKSKGAQKH 264
+ + +F K D+ KS G + H
Sbjct: 211 GSRRWAFLK----DLLHRSKSDGGKNH 233
>05_07_0267 +
28818396-28818513,28819292-28819697,28819796-28819973,
28820414-28820553,28820629-28821874,28821952-28822052,
28822170-28822314,28822755-28822823,28822910-28822955,
28823049-28823422,28823622-28823701,28823813-28823948,
28824199-28824358,28824582-28824664,28825417-28825545
Length = 1136
Score = 28.3 bits (60), Expect = 3.1
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 46 LKPTTQSSSITPKSATRKVTSVASTTVGSKKLTSSTTVKPASTSKKVTEKQSFTKKMTVD 225
LKP + S+S+T S + + ++STT G SS ++ S+ + E T+D
Sbjct: 363 LKPNSSSTSLTNSSHPLESSILSSTTHGHS--NSSMSLHSQSSGRTTAECYEGEWAQTMD 420
Query: 226 VFVAKKSKG-AQKH 264
+ +KS+ A +H
Sbjct: 421 ISSQQKSQALAPEH 434
>02_05_0769 +
31616644-31616875,31616980-31617203,31617308-31617426,
31617528-31617684,31617928-31618029,31618111-31618230,
31618761-31618855,31619900-31619984,31620090-31620180,
31620534-31620618,31620702-31620806,31621019-31621894,
31622016-31622124,31622266-31622414,31622518-31622737
Length = 922
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 279 IIVGVLFCVFALVGSVVAWRRYG 347
++ VL C+ +L GS+ +WRR+G
Sbjct: 671 VLDAVLLCLCSLFGSLDSWRRHG 693
>06_03_1365 + 29598130-29598523,29599016-29599078,29599292-29599398
Length = 187
Score = 27.9 bits (59), Expect = 4.0
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +1
Query: 58 TQSSSITPKSATRKVTSVAST----TVGSKKLTSSTTVKPASTSKKVTEKQSFTKKMTV 222
T +S KSA+ T+ A+ T GS +S++T AST+ K T T ++++
Sbjct: 110 TTDASACAKSASSSATAAAAAAGAGTAGSTAASSASTGNAASTAAKPTASGGATHRLSL 168
>01_06_0948 -
33242219-33242530,33242632-33242782,33242874-33243111,
33243196-33243298,33243323-33243406,33243640-33243815,
33243943-33244074,33248406-33248967,33249084-33249842
Length = 838
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2
Query: 236 ATKTSTVIFLVKDCFSVTFLLVLAGFTV 153
+ K +I +V SVTFL VLAGF V
Sbjct: 446 SNKARVIIAIVVSISSVTFLSVLAGFLV 473
>11_06_0249 +
21697863-21697923,21698119-21698128,21698160-21698766,
21699011-21699090,21699182-21699263,21699357-21699428,
21700128-21700406
Length = 396
Score = 27.5 bits (58), Expect = 5.3
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +1
Query: 34 TTKVLKPTTQSSSITPKS--ATRKVTSVASTTVGSKKLTSSTTVKPASTSKKVTEK 195
TT K +S+ T KS AT AST SK TT PA + TE+
Sbjct: 219 TTSTKKMKRSASATTRKSLQATNTDEGNASTLTNSKSSNGRTTTVPAGPVFRCTER 274
>10_08_0198 + 15688142-15690427,15690524-15690607,15691232-15691336,
15691420-15691528,15693037-15693188,15693278-15693583
Length = 1013
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 7 RSSSPSQKQTTKVLKPTTQSSSITPKSATRKVTSVASTTVGSKKLTSS 150
R SP QK + P SSS T + + + + T VGS+ + S
Sbjct: 952 RPKSPPQKSQQQQSMPPMGSSSSTNRRSVMNSSQIVVTVVGSETMMPS 999
>06_03_1248 + 28685911-28687719
Length = 602
Score = 27.1 bits (57), Expect = 7.1
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 4 RRSSSPSQKQTTKVLKPTTQSSSITPKSATRKVTSVASTTVGSKKLTSSTTVKPASTSKK 183
R SSP TT+ T SSS P + + T +S S SS+++ +S S K
Sbjct: 21 RPPSSPRSSDTTRRSSFTAASSSDKPVPSFLRPTVSSSLHSSSSSSPSSSSLLSSSPSSK 80
Query: 184 VT 189
T
Sbjct: 81 GT 82
>04_04_0292 +
24181486-24181515,24181729-24182616,24182702-24182854,
24183131-24183185,24184860-24185047,24185271-24185351
Length = 464
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -2
Query: 128 PTVVEATDVTLRVALLGVMELD*VVGLRTLVVCFWDGLEE 9
PT+++ + L V G ++L + LRTL+V W GLEE
Sbjct: 220 PTLIK---MELVVCTFGSVDLKSLPKLRTLIVDTWMGLEE 256
>04_03_0090 -
11037111-11037568,11039606-11039671,11040524-11040724,
11041049-11041157
Length = 277
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 401 HFRVIRDLTSQPSNDQHAAVTSPSHHGSDQRKYTKQ 294
H VI+D TS D+ +T P H K+T++
Sbjct: 218 HLGVIQDYTSNRKKDKLNLITDPDLHEHKNGKFTEK 253
>04_01_0022 +
324422-324445,324870-325265,325366-325546,325781-326072,
326389-326461,326610-326700,326815-326894,326992-327234
Length = 459
Score = 27.1 bits (57), Expect = 7.1
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +1
Query: 52 PTTQSSSITPKSATRKVTSVASTTVGSKKLTSSTTVKPASTSKKVTEKQSFTKKMTV 222
PT ++ ITP T +++ AST GS + ST+V P K SF + TV
Sbjct: 45 PTQAAADITPTPTTSILSTKASTPAGSCS-SRSTSVAP-----KPQRSSSFMLRQTV 95
>01_03_0050 +
11959421-11959736,11959892-11959960,11960641-11960979,
11961090-11961152,11962472-11962962,11963773-11964441
Length = 648
Score = 27.1 bits (57), Expect = 7.1
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = +1
Query: 4 RRSSSPSQKQTTKVLKPTTQSSSITPKSATRKVTSVASTTVGSKKLTSSTTVKPASTSKK 183
+R K+ + + TQS + AT+K T ST+ +KKL T P KK
Sbjct: 524 KRRRKLKMKEGSGPVSGLTQSKEASKTPATKKKTE--STSPAAKKLKIEETTAP-DEGKK 580
Query: 184 VTEKQSFTKK 213
+ S KK
Sbjct: 581 AVKTHSTGKK 590
>08_01_0842 - 8252232-8253155
Length = 307
Score = 26.6 bits (56), Expect = 9.3
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +1
Query: 1 ARRSSSPSQKQTTKVLKPTTQSSSITPKSATRKVTS---VASTTVGSKKLTSSTT 156
A S+SPS + L P T + KS T T+ VA+ +V S SS T
Sbjct: 106 AAASASPSSSPVSPPLPPVTTQPAAAVKSLTLDFTNPAKVAAASVTSTSFFSSVT 160
>01_01_0139 + 1263356-1264273
Length = 305
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +1
Query: 7 RSSSPSQKQTTKVLKPTTQSSSITPKSATRK 99
RSS+P+++ PTT S++ + ++ TR+
Sbjct: 114 RSSAPTRRTAAGATSPTTPSTTTSARARTRR 144
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,027,079
Number of Sequences: 37544
Number of extensions: 234156
Number of successful extensions: 783
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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