Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30351
         (488 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68335-3|CAA92730.2|  540|Caenorhabditis elegans Hypothetical pr...    28   3.2  
AL132862-33|CAB70222.3|  308|Caenorhabditis elegans Hypothetical...    27   9.7  

>Z68335-3|CAA92730.2|  540|Caenorhabditis elegans Hypothetical
           protein C29F4.2 protein.
          Length = 540

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -1

Query: 314 TFNFHYTIFYSKDKVIIKSLYK 249
           T+N+HY +  S+ KVI+K ++K
Sbjct: 2   TYNYHYDLATSQRKVILKLIFK 23


>AL132862-33|CAB70222.3|  308|Caenorhabditis elegans Hypothetical
           protein Y73F8A.3 protein.
          Length = 308

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 377 LFHVSXLMIKFFF*LVL*SIFTFNFHYTIFYS 282
           + H S L  K+F+  +L S  TF F+Y  +Y+
Sbjct: 116 VIHNSSLTKKYFYIYMLGSFITFAFYYFYWYA 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,955,682
Number of Sequences: 27780
Number of extensions: 153330
Number of successful extensions: 252
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 252
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)