Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30346
         (447 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VY52 Cluster: CG32597-PA; n=1; Drosophila melanogaste...    62   5e-09
UniRef50_Q17GK1 Cluster: Putative uncharacterized protein; n=2; ...    60   2e-08
UniRef50_Q5TTR7 Cluster: ENSANGP00000026116; n=1; Anopheles gamb...    59   4e-08
UniRef50_Q9SHN5 Cluster: F7F22.5; n=7; Magnoliophyta|Rep: F7F22....    33   2.1  
UniRef50_Q4J1J7 Cluster: Binding-protein-dependent transport sys...    32   4.9  
UniRef50_A7QLR4 Cluster: Chromosome chr18 scaffold_121, whole ge...    31   8.6  
UniRef50_Q172Z7 Cluster: Cdc42 gtpase-activating protein; n=2; C...    31   8.6  

>UniRef50_Q9VY52 Cluster: CG32597-PA; n=1; Drosophila
           melanogaster|Rep: CG32597-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 321

 Score = 62.1 bits (144), Expect = 5e-09
 Identities = 25/38 (65%), Positives = 33/38 (86%)
 Frame = +3

Query: 333 FGSSVAIHKLRETKWFKHDEQNILCAVLESGFILEVRT 446
           FGSSVA+ KLRE+KWFK +EQ I CAV+E GF++E+R+
Sbjct: 80  FGSSVAVQKLRESKWFKPEEQRIFCAVVECGFVVEIRS 117


>UniRef50_Q17GK1 Cluster: Putative uncharacterized protein; n=2;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 233

 Score = 60.1 bits (139), Expect = 2e-08
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = +3

Query: 321 KKXRFGSSVAIHKLRETKWFKHDEQNILCAVLESGFILEVR 443
           K   FGSSVAI KLRE+KWF   E+ I CAV+E+GFI+E+R
Sbjct: 49  KSGSFGSSVAIQKLRESKWFDRGEERIFCAVIEAGFIVELR 89


>UniRef50_Q5TTR7 Cluster: ENSANGP00000026116; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000026116 - Anopheles gambiae
           str. PEST
          Length = 241

 Score = 59.3 bits (137), Expect = 4e-08
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = +3

Query: 333 FGSSVAIHKLRETKWFKHDEQNILCAVLESGFILEVR 443
           FGSSVAI KLRE+KWF   E+ I CAV+E+GFI+EVR
Sbjct: 11  FGSSVAIQKLRESKWFDAGEERIFCAVIENGFIVEVR 47


>UniRef50_Q9SHN5 Cluster: F7F22.5; n=7; Magnoliophyta|Rep: F7F22.5 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 322

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +3

Query: 294 SQAQALFAPKKXRFGSSVAIHKLRETKWFKHDE 392
           S A +L   K  RFG   + H+LR TKWFK D+
Sbjct: 7   SSAISLLDIKLRRFGVGASNHELRLTKWFKGDQ 39


>UniRef50_Q4J1J7 Cluster: Binding-protein-dependent transport
           systems inner membrane component precursor; n=2;
           Proteobacteria|Rep: Binding-protein-dependent transport
           systems inner membrane component precursor - Azotobacter
           vinelandii AvOP
          Length = 272

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 378 TTWSRGVCGWPPKNQXVXSWGRKVLE 301
           T W+ G+  WPP  Q + SWG+ +++
Sbjct: 53  TLWTLGLDAWPPDFQRLSSWGKPLMD 78


>UniRef50_A7QLR4 Cluster: Chromosome chr18 scaffold_121, whole
           genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_121, whole genome shotgun
           sequence - Vitis vinifera (Grape)
          Length = 287

 Score = 31.5 bits (68), Expect = 8.6
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +1

Query: 316 PPRXHXLVLRWPSTNSARPSGLSTMNRTYYALFWN 420
           P   H  ++ W      +P+     +RT+++LFWN
Sbjct: 159 PAEGHSTIMSWRIKQGKQPTKCPRTSRTFFSLFWN 193


>UniRef50_Q172Z7 Cluster: Cdc42 gtpase-activating protein; n=2;
            Culicidae|Rep: Cdc42 gtpase-activating protein - Aedes
            aegypti (Yellowfever mosquito)
          Length = 2080

 Score = 31.5 bits (68), Expect = 8.6
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 168  IRHRSGFNGSEVRNLPEFPAXQAARKDPSPQPTVKGLLSRFGSQAQ 305
            IR R  FNG   +N     +  A R   SPQ ++K + + F S++Q
Sbjct: 2032 IRERDSFNGGSTKNFVRNGSSGAQRDRFSPQISIKDVAAMFESRSQ 2077


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,204,787
Number of Sequences: 1657284
Number of extensions: 8828908
Number of successful extensions: 21308
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21306
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)