Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30342
         (551 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   4.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   4.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.4  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   5.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   7.2  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   9.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.5  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +2

Query: 77  SWSIAAYFPSATTTKANFYGTAWRLRA 157
           SW       S  T    FYG +W L++
Sbjct: 231 SWLSGGASASKVTLSVPFYGHSWYLQS 257


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +1

Query: 73  KFLVHRSIFSISHNHKSQLLWNSLASQGIHRIPFLVALLG 192
           +FL +  I   SHN    L  N     G+ R+     LLG
Sbjct: 317 RFLGNLRIVDFSHNRLRSLPDNLFRETGLERLDVSHNLLG 356


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 78  PGPSQHIFHQPQPQKPTSMEQ 140
           P P++    +P+P +PT +E+
Sbjct: 255 PRPTKVSRRKPRPPRPTQVEE 275


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -1

Query: 290  WEPGPYCLY*YWHPTD 243
            W PG    Y  W PT+
Sbjct: 1358 WNPGSTTNYPEWQPTE 1373


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 473 TAPHMLGNELNPKVGLR 523
           T PH LGN + P V LR
Sbjct: 9   TPPHSLGNTVTP-VSLR 24


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 247 LTPGLFGSCCIS*ATFRPPQE 185
           L+P   G+     A FRPPQE
Sbjct: 196 LSPSYGGTTYSFTADFRPPQE 216


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 457 DWPELYSAAHARQRIESESGAAXR 528
           DW    S AH    ++SES  A +
Sbjct: 83  DWVYYESRAHIHCSVKSESSQAAK 106


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 385 RSPVPTRTVCNTYRTRHETENGN 453
           +  +P R +    R +HE +NG+
Sbjct: 596 KKSLPVRKLLELERAQHEFKNGD 618


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,559
Number of Sequences: 336
Number of extensions: 2973
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)