Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30342
         (551 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.51 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   6.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   6.3  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   8.3  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 243 VSGMPVLVKTIWARFPY 293
           +SG+P  +  IW+ FPY
Sbjct: 104 ISGLPPEIYYIWSHFPY 120


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = +3

Query: 246 SGMPVLVKTIWARFPYARCRRLSGTRNEQ 332
           +G+P   + IW+ FP  + + +    N++
Sbjct: 303 NGLPFPQRPIWSNFPIYKYKYIREIMNKE 331


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = +3

Query: 246 SGMPVLVKTIWARFPYARCRRLSGTRNEQ 332
           +G+P   + IW+ FP  + + +    N++
Sbjct: 303 NGLPFPQRPIWSNFPIYKYKYIREIMNKE 331


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/38 (23%), Positives = 14/38 (36%)
 Frame = +2

Query: 74  NSWSIAAYFPSATTTKANFYGTAWRLRAFTAYRSWSLF 187
           N W +  YF      KA++    ++   F     W  F
Sbjct: 4   NIWWLILYFSIVCQAKAHYSLRDFKANIFQVKYQWKYF 41


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,527
Number of Sequences: 438
Number of extensions: 3813
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)