Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30342
(551 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18035.1 68416.m02292 histone H1/H5 family protein contains P... 31 0.39
At3g16510.1 68416.m02107 C2 domain-containing protein contains s... 31 0.68
At1g49010.1 68414.m05495 myb family transcription factor contain... 30 0.89
At5g26180.2 68418.m03115 NOL1/NOP2/sun family protein similar to... 30 1.2
At5g26180.1 68418.m03114 NOL1/NOP2/sun family protein similar to... 30 1.2
At1g74180.1 68414.m08591 leucine-rich repeat family protein cont... 30 1.2
At5g57670.1 68418.m07207 protein kinase family protein contains ... 29 1.6
At2g43960.1 68415.m05466 SWAP (Suppressor-of-White-APricot)/surp... 29 1.6
At2g32850.2 68415.m04025 protein kinase family protein contains ... 29 1.6
At2g32850.1 68415.m04024 protein kinase family protein contains ... 29 1.6
At1g32190.1 68414.m03959 expressed protein 29 1.6
At3g60340.2 68416.m06746 palmitoyl protein thioesterase family p... 29 2.1
At3g60340.1 68416.m06745 palmitoyl protein thioesterase family p... 29 2.1
At3g04910.1 68416.m00533 protein kinase family protein contains ... 29 2.7
At4g28050.1 68417.m04024 senescence-associated protein, putative... 28 3.6
At3g43583.1 68416.m04636 hypothetical protein 28 4.8
At1g48620.1 68414.m05439 histone H1/H5 family protein weak simil... 27 6.3
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 27 6.3
At5g07540.2 68418.m00864 glycine-rich protein (GRP16) oleosin; g... 27 8.3
At5g07540.1 68418.m00863 glycine-rich protein (GRP16) oleosin; g... 27 8.3
At2g31040.1 68415.m03786 ATP synthase protein I -related contain... 27 8.3
>At3g18035.1 68416.m02292 histone H1/H5 family protein contains Pfam
domain, PF00538: linker histone H1 and H5 family;similar
to HMG I/Y like protein (GI:15706274) [Glycine
max];similar to HMR1 protein (GI:4218141) [Antirrhinum
majus]; similar to high mobility group protein
(GI:1483173) [Canavalia gladiata]
Length = 480
Score = 31.5 bits (68), Expect = 0.39
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 78 PGP-SQHIFHQPQPQKPTSMEQPGVSGHSPH 167
P P + H+ QPQPQ T + QP + SPH
Sbjct: 30 PNPYNNHVVFQPQPQTQTQIPQPQMFQLSPH 60
>At3g16510.1 68416.m02107 C2 domain-containing protein contains
similarity to shock protein SRC2 [Glycine max]
gi|2055230|dbj|BAA19769 ; contains Pfam profile
PF00168:C2 domain
Length = 360
Score = 30.7 bits (66), Expect = 0.68
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = +3
Query: 78 PGPSQHIFHQPQPQK------PTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKP 239
P P H FHQ QP + P+S + G+ P T PG +G + + NKP
Sbjct: 269 PPPPGHSFHQTQPSQSFHGFAPSSPQNQHGYGYPPPTSPG-YGYGCPTTQVPPKNNNNKP 327
Query: 240 GV 245
G+
Sbjct: 328 GL 329
>At1g49010.1 68414.m05495 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 314
Score = 30.3 bits (65), Expect = 0.89
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 111 QPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVS-GMPVLV 266
+P +P QP H P T+ G +GG V + P+ G + G PV++
Sbjct: 221 RPAQPQPQPQPQPQQHHPPTMAGLGMYGGAPVGQPIIAPPDHMGSAVGTPVML 273
>At5g26180.2 68418.m03115 NOL1/NOP2/sun family protein similar to
NOL1R [Homo sapiens] GI:16226071; contains Pfam profile
PF01189: NOL1/NOP2/sun family
Length = 567
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 102 HQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGG 197
H+P+ T + GV H P T PG+ + G
Sbjct: 41 HKPKTSPATKQKFSGVESHKPKTPPGKQRFSG 72
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 102 HQPQPQKPTSMEQPGVSGHSPHTVPG-RSSWGGLNVAYEMQQDPNKPGVSG 251
H+P+P T GV H P T P + + G+ +++ + P K SG
Sbjct: 23 HKPKPPPATKQPFSGVESHKPKTSPATKQKFSGVE-SHKPKTPPGKQRFSG 72
>At5g26180.1 68418.m03114 NOL1/NOP2/sun family protein similar to
NOL1R [Homo sapiens] GI:16226071; contains Pfam profile
PF01189: NOL1/NOP2/sun family
Length = 567
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 102 HQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGG 197
H+P+ T + GV H P T PG+ + G
Sbjct: 41 HKPKTSPATKQKFSGVESHKPKTPPGKQRFSG 72
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 102 HQPQPQKPTSMEQPGVSGHSPHTVPG-RSSWGGLNVAYEMQQDPNKPGVSG 251
H+P+P T GV H P T P + + G+ +++ + P K SG
Sbjct: 23 HKPKPPPATKQPFSGVESHKPKTSPATKQKFSGVE-SHKPKTPPGKQRFSG 72
>At1g74180.1 68414.m08591 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 951
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +1
Query: 19 ILYRLYDRLHSLRFRFNLKFLVHRSIFSISHNHKSQLLWNSLASQGIHRIPFLVALLGVV 198
I+ R+++ L + L+ LV+ SIF S+N + L+ +S+ H I L++ +
Sbjct: 505 IVLRMHNNLFTGEIGVGLRTLVNLSIFDASNNRLTGLISSSIPPDSSHLIMLLLSNNLLE 564
Query: 199 *TLP 210
TLP
Sbjct: 565 GTLP 568
>At5g57670.1 68418.m07207 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 416
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 421 YRTRHETENGNKDWPELYSAA 483
Y HE ENG+ DWP Y A
Sbjct: 187 YSALHENENGSLDWPVRYKIA 207
>At2g43960.1 68415.m05466 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam profile: PF01805
surp module
Length = 442
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Frame = -2
Query: 331 CSFLVPDSRRHRAYGNRAHIVFTSTGI----PLTPGLFGSCCI 215
CSF+ P R H Y + S + PL PGL CC+
Sbjct: 53 CSFVFPKGRDHHIYKQKIAEYTKSPPLHSPPPLPPGLVDQCCL 95
>At2g32850.2 68415.m04025 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 670
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 108 PQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQD 227
P P + +S QP HS + P R G +E+QQD
Sbjct: 519 PSPSRDSSQNQPSPGMHSMSSTPSRDKMEG--TMWELQQD 556
>At2g32850.1 68415.m04024 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 650
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 108 PQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQD 227
P P + +S QP HS + P R G +E+QQD
Sbjct: 519 PSPSRDSSQNQPSPGMHSMSSTPSRDKMEG--TMWELQQD 556
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 166 CGECPETPGCSIEVGFCGCG*WKICCDG 83
C +CP+T C GC W CC G
Sbjct: 376 CLKCPDTECCRSSCCCSGCFSWLCCCGG 403
>At3g60340.2 68416.m06746 palmitoyl protein thioesterase family
protein palmitoyl-protein thioesterase precursor, Mus
musculus, EMBL:AF071025
Length = 338
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 325 TSSDGVCCQHGAGSYASWSFRSPVPTRTVCNTYRTRHETENG 450
+ S G C + G GS+ SW+ T VC ++ E +G
Sbjct: 51 SGSQGYCLEIGNGSWDSWTMPLLDQTSVVCEKVKSMPELSDG 92
>At3g60340.1 68416.m06745 palmitoyl protein thioesterase family
protein palmitoyl-protein thioesterase precursor, Mus
musculus, EMBL:AF071025
Length = 338
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 325 TSSDGVCCQHGAGSYASWSFRSPVPTRTVCNTYRTRHETENG 450
+ S G C + G GS+ SW+ T VC ++ E +G
Sbjct: 51 SGSQGYCLEIGNGSWDSWTMPLLDQTSVVCEKVKSMPELSDG 92
>At3g04910.1 68416.m00533 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 700
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/80 (27%), Positives = 32/80 (40%)
Frame = +1
Query: 274 YGPGSHMPDAAGYQEQETSSDGVCCQHGAGSYASWSFRSPVPTRTVCNTYRTRHETENGN 453
Y H+PD Y ++S + Q+ G+Y S S R N Y + HE +NG
Sbjct: 303 YRQPHHLPD---YYNYPSNSSSLNRQYSNGNYPS---NSSSLNRQYSNGYNSHHEYQNGW 356
Query: 454 KDWPELYSAAHARQRIESES 513
P H + ES +
Sbjct: 357 AYNPAETEETHGIELFESRN 376
>At4g28050.1 68417.m04024 senescence-associated protein, putative
similar to senescence-associated protein 5 [Hemerocallis
hybrid cultivar] gi|3551954|gb|AAC34855
Length = 263
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 277 GPGSHMPDAAGYQEQETSSDGVCCQHGAGSYASWS-FRSPVPTRTVCNTYRTRHETEN 447
G G + D GY+E + Q + +W RS + VC+TYRTR+ + N
Sbjct: 100 GAGEVISDR-GYKEYHVADYSNWLQKRVNNAKNWERIRSCLMYSDVCSTYRTRYASIN 156
>At3g43583.1 68416.m04636 hypothetical protein
Length = 100
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 108 PQPQKPTSMEQPGVSGHSPH 167
P P+KPTS EQP PH
Sbjct: 39 PSPEKPTSPEQPSSPEPPPH 58
>At1g48620.1 68414.m05439 histone H1/H5 family protein weak
similarity to HMG I/Y like protein [Glycine max]
GI:15706274, HMG-I/Y protein HMGa [Triticum aestivum]
GI:20502966; contains Pfam profiles PF00538: linker
histone H1 and H5 family, PF02178: AT hook motif
Length = 479
Score = 27.5 bits (58), Expect = 6.3
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +3
Query: 111 QPQKPTSME--QPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPN--KPGVSGMPVLVKTIW 278
QPQ+P +P G SP P S GG+ + P+ G P++V
Sbjct: 235 QPQQPVKRPPGRPRKDGTSPTVKPAASVSGGVETVKRRGRPPSGRAAGRERKPIVVSAPA 294
Query: 279 ARFPY 293
+ FPY
Sbjct: 295 SVFPY 299
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles
PF01846: FF domain, PF00397: WW domain
Length = 946
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 280 PGSHMPDAAGYQEQETSSDG-VCCQHGAGSYAS 375
PG+ P +A ++ TS+DG C HG GS S
Sbjct: 170 PGNLTPQSASDWQEHTSADGRKCLFHGFGSMNS 202
>At5g07540.2 68418.m00864 glycine-rich protein (GRP16) oleosin;
glycine-rich protein 16 (GRP16) PMID:11431566
Length = 190
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +3
Query: 102 HQPQPQ-KPTSMEQPGVSGHSPHTVPGRSSWGG 197
+ P P+ PT +QPG SG + PG S G
Sbjct: 95 NNPAPKGAPTKADQPGASGGASGDKPGEMSGAG 127
>At5g07540.1 68418.m00863 glycine-rich protein (GRP16) oleosin;
glycine-rich protein 16 (GRP16) PMID:11431566
Length = 244
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +3
Query: 102 HQPQPQ-KPTSMEQPGVSGHSPHTVPGRSSWGG 197
+ P P+ PT +QPG SG + PG S G
Sbjct: 95 NNPAPKGAPTKADQPGASGGASGDKPGEMSGAG 127
>At2g31040.1 68415.m03786 ATP synthase protein I -related contains
weaks similarity to Swiss-Prot:P08443 ATP synthase
protein I [Synechococcus sp.]
Length = 350
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 84 PSQHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGG 197
P++ I +P+K ++ PG G P T R WGG
Sbjct: 27 PTKIILPNKKPEKWSTGVAPGEYGGPPTTTKLRKYWGG 64
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,956,371
Number of Sequences: 28952
Number of extensions: 289367
Number of successful extensions: 855
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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