BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS30340 (525 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_O97272 Cluster: Putative uncharacterized protein MAL3P5... 35 1.3 UniRef50_Q9KEX1 Cluster: BH0728 protein; n=1; Bacillus haloduran... 33 3.0 UniRef50_Q5CRF5 Cluster: U5snrp Brr2 SFII RNA helicase; n=2; Cry... 33 3.0 >UniRef50_O97272 Cluster: Putative uncharacterized protein MAL3P5.21; n=1; Plasmodium falciparum 3D7|Rep: Putative uncharacterized protein MAL3P5.21 - Plasmodium falciparum (isolate 3D7) Length = 936 Score = 34.7 bits (76), Expect = 1.3 Identities = 27/59 (45%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = +2 Query: 197 YYNQIKLLKKECNLQNKYHRTNNLRLYYCSILESELDSGHINII-HCVYLFYILNIAIL 370 Y I LKK N Q HR NN+ Y IL E D INI+ C+Y YI NI IL Sbjct: 775 YIEVINKLKK--NQQKITHRNNNINTQYKKIL-YEYDK--INILKKCIYWLYIGNIDIL 828 >UniRef50_Q9KEX1 Cluster: BH0728 protein; n=1; Bacillus halodurans|Rep: BH0728 protein - Bacillus halodurans Length = 315 Score = 33.5 bits (73), Expect = 3.0 Identities = 12/46 (26%), Positives = 31/46 (67%), Gaps = 1/46 (2%) Frame = -2 Query: 308 NLTLTQVLSSNIILNYLFDDIYFVNYILFLIVLFGYNIL-LDITVA 174 NL++ + + +++ ++ DDI+F+ +I+ +++L Y + L +T+A Sbjct: 49 NLSVVPIFNEDVVYTWMDDDIFFIGFIILMLLLPVYLLAWLPVTIA 94 >UniRef50_Q5CRF5 Cluster: U5snrp Brr2 SFII RNA helicase; n=2; Cryptosporidium|Rep: U5snrp Brr2 SFII RNA helicase - Cryptosporidium parvum Iowa II Length = 1204 Score = 33.5 bits (73), Expect = 3.0 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +3 Query: 36 KYDNTATVNMGGFANRNYLXDDIYDFDSDEEVTNKRDRYCVVGSKDGY 179 +Y+N T+ +G NYL D+ Y D+D ++ Y + +KD Y Sbjct: 244 EYENDVTLEIGKDEAENYLNDENYSRDNDYNENHEHSGYIRLKNKDEY 291 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 441,403,392 Number of Sequences: 1657284 Number of extensions: 7344330 Number of successful extensions: 20171 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 19507 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 20163 length of database: 575,637,011 effective HSP length: 95 effective length of database: 418,195,031 effective search space used: 33037407449 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -