Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30337
         (503 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   1.2  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   1.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   1.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   1.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   6.3  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 4   STNLPWIEKYRPQTF 48
           S+N PW E+Y+P ++
Sbjct: 69  SSNRPWWERYQPVSY 83


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 4   STNLPWIEKYRPQTF 48
           S+N PW E+Y+P ++
Sbjct: 70  SSNRPWWERYQPVSY 84


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 4   STNLPWIEKYRPQTF 48
           S+N PW E+Y+P ++
Sbjct: 70  SSNRPWWERYQPVSY 84


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 490 KTTALTPSSVYDK 452
           K  A+TPSS+YDK
Sbjct: 14  KFFAITPSSIYDK 26


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 51  VESLWPVFLYPW 16
           V S WP+FL  W
Sbjct: 112 VASRWPLFLNEW 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,831
Number of Sequences: 336
Number of extensions: 1857
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)