Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30337
(503 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-... 103 3e-22
AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C su... 103 3e-22
AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein. 103 3e-22
BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C (a... 97 4e-20
BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C (a... 97 4e-20
AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C (a... 97 4e-20
AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein. 97 4e-20
L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-... 72 1e-12
CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein. 72 1e-12
BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C (a... 72 1e-12
BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C (a... 72 1e-12
AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C (a... 72 1e-12
AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5 ... 72 1e-12
M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-... 62 8e-10
CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein. 62 8e-10
BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C (a... 62 8e-10
BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C (a... 62 8e-10
BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C (a... 62 8e-10
AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C (a... 62 8e-10
L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-... 44 3e-04
BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C (a... 44 3e-04
BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C (a... 44 3e-04
AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C (a... 44 3e-04
AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3 ... 44 3e-04
AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C (a... 44 3e-04
BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein pr... 43 5e-04
BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe... 43 5e-04
AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe... 43 5e-04
AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein. 43 5e-04
AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint p... 43 5e-04
AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint p... 43 5e-04
AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint p... 43 5e-04
AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein. 43 5e-04
AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolo... 43 5e-04
AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein prot... 43 5e-04
AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint p... 43 5e-04
BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase interac... 39 0.009
AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase interac... 39 0.009
AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase interac... 39 0.009
AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase interac... 39 0.009
AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase interac... 39 0.009
AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL... 39 0.009
AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase interac... 39 0.009
AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase interac... 36 0.061
AY072792-1|AAL68396.1| 994|Homo sapiens PAAD and NACHT-containi... 34 0.32
AK056688-1|BAB71254.1| 919|Homo sapiens protein ( Homo sapiens ... 34 0.32
AF482706-1|AAL88672.1| 916|Homo sapiens ribonuclease inhibitor ... 34 0.32
AF479747-1|AAL87104.1| 994|Homo sapiens PYRIN-containing APAF1-... 34 0.32
AF442488-1|AAL35293.1| 994|Homo sapiens NALP4 protein. 34 0.32
AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility as... 33 0.43
AK022797-1|BAB14248.1| 801|Homo sapiens protein ( Homo sapiens ... 33 0.43
AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protei... 33 0.43
L24544-1|AAA70430.1| 993|Homo sapiens DNA helicase protein. 32 1.3
BC050326-1|AAH50326.1| 994|Homo sapiens NLR family, pyrin domai... 32 1.3
BC025299-1|AAH25299.1| 868|Homo sapiens Unknown (protein for IM... 32 1.3
L14754-1|AAA53082.1| 993|Homo sapiens DNA-binding protein protein. 31 2.3
BC105090-1|AAI05091.1| 993|Homo sapiens immunoglobulin mu bindi... 31 2.3
BC105088-1|AAI05089.1| 993|Homo sapiens immunoglobulin mu bindi... 31 2.3
BC050576-1|AAH50576.1| 479|Homo sapiens chromosome 9 open readi... 31 2.3
BC034776-1|AAH34776.1| 479|Homo sapiens chromosome 9 open readi... 31 2.3
BC000290-1|AAH00290.1| 868|Homo sapiens IGHMBP2 protein protein. 31 2.3
AL445645-1|CAH72109.1| 479|Homo sapiens chromosome 9 open readi... 31 2.3
AL160165-5|CAH70535.1| 479|Homo sapiens chromosome 9 open readi... 31 2.3
AK057266-1|BAB71402.1| 479|Homo sapiens protein ( Homo sapiens ... 31 2.3
Y18418-1|CAB46271.1| 456|Homo sapiens erythrocyte cytosolic pro... 30 4.0
DQ469310-1|ABF13334.1| 386|Homo sapiens RUVBL1-FK protein. 30 4.0
BT007057-1|AAP35706.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 30 4.0
BC012886-1|AAH12886.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 30 4.0
BC007426-1|AAH07426.1| 172|Homo sapiens TAF9 RNA polymerase II,... 30 4.0
BC007349-1|AAH07349.1| 172|Homo sapiens TAF9 RNA polymerase II,... 30 4.0
BC002993-1|AAH02993.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 30 4.0
BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associa... 30 4.0
AK222575-1|BAD96295.1| 456|Homo sapiens TATA binding protein in... 30 4.0
AK222563-1|BAD96283.1| 456|Homo sapiens TATA binding protein in... 30 4.0
AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens ... 30 4.0
AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens ... 30 4.0
AJ878881-1|CAI48031.1| 172|Homo sapiens coilin-interacting nulc... 30 4.0
AJ878880-1|CAI48030.1| 172|Homo sapiens coilin-interacting nucl... 30 4.0
AJ010058-1|CAA08986.1| 456|Homo sapiens Nuclear matrix protein ... 30 4.0
AF380344-1|AAM45570.1| 456|Homo sapiens pontin 52 protein. 30 4.0
AF151895-1|AAD34132.1| 172|Homo sapiens CGI-137 protein protein. 30 4.0
AF110777-1|AAF14860.1| 172|Homo sapiens adrenal gland protein A... 30 4.0
AF099084-1|AAD04427.1| 456|Homo sapiens Pontin52 protein. 30 4.0
AF098534-1|AAC97951.1| 584|Homo sapiens RAD17 isoform 4 protein. 30 4.0
AF070735-1|AAC77819.1| 456|Homo sapiens RuvB-like protein RUVBL... 30 4.0
AB012122-1|BAA28169.1| 456|Homo sapiens TIP49 protein. 30 4.0
D42046-1|BAA07647.1| 1077|Homo sapiens KIAA0083 protein. 29 7.0
BC053574-1|AAH53574.1| 494|Homo sapiens DNA2L protein protein. 29 7.0
BC041115-1|AAH41115.1| 435|Homo sapiens DNA2L protein protein. 29 7.0
BC009312-1|AAH09312.1| 1003|Homo sapiens Mov10, Moloney leukemia... 29 7.0
BC004499-1|AAH04499.2| 601|Homo sapiens MOV10 protein protein. 29 7.0
BC002548-1|AAH02548.1| 1003|Homo sapiens Mov10, Moloney leukemia... 29 7.0
AY682080-1|AAT74625.1| 4646|Homo sapiens dynein, cytoplasmic, he... 29 7.0
AL603832-3|CAI14056.1| 947|Homo sapiens Mov10, Moloney leukemia... 29 7.0
AL603832-2|CAI14055.1| 1003|Homo sapiens Mov10, Moloney leukemia... 29 7.0
AL136233-5|CAI17238.1| 1040|Homo sapiens DNA2 DNA replication he... 29 7.0
AK074174-1|BAB85000.1| 925|Homo sapiens FLJ00247 protein protein. 29 7.0
AB046851-1|BAB13457.1| 1032|Homo sapiens KIAA1631 protein protein. 29 7.0
AB002323-1|BAA20783.3| 4658|Homo sapiens KIAA0325 protein protein. 29 7.0
BC035132-1|AAH35132.1| 743|Homo sapiens threonine synthase-like... 29 9.2
BC005102-1|AAH05102.1| 190|Homo sapiens chromosome 1 open readi... 29 9.2
AL512598-6|CAH70791.1| 743|Homo sapiens threonine synthase-like... 29 9.2
AL122003-5|CAI22244.1| 190|Homo sapiens chromosome 1 open readi... 29 9.2
AL122003-4|CAI22243.1| 228|Homo sapiens chromosome 1 open readi... 29 9.2
AF416713-1|AAL16807.1| 190|Homo sapiens unknown protein. 29 9.2
>M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-kDa
subunit protein.
Length = 354
Score = 103 bits (248), Expect = 3e-22
Identities = 50/58 (86%), Positives = 52/58 (89%)
Frame = +2
Query: 254 RXKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALAANNS 427
R KIKMFAQQKVTLP GRHKI+ILDEADSMTDGAQQALRRTM +YS TTRFALA N S
Sbjct: 117 RNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNAS 174
Score = 96.7 bits (230), Expect = 4e-20
Identities = 43/56 (76%), Positives = 48/56 (85%)
Frame = +1
Query: 13 LPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL LAR
Sbjct: 36 LPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLAR 91
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +3
Query: 180 SLLGVSFKDAVLXLNASXDRGIDVV 254
+LLG + KDA+L LNAS DRGIDVV
Sbjct: 92 ALLGPALKDAMLELNASNDRGIDVV 116
Score = 33.5 bits (73), Expect = 0.43
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 426 VIEICNKENLSYTEEGVSAVVFTAQG 503
++ + KE + YT++G+ A++FTAQG
Sbjct: 202 LMNVIEKERVPYTDDGLEAIIFTAQG 227
>AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C
subunit 2 protein.
Length = 354
Score = 103 bits (248), Expect = 3e-22
Identities = 50/58 (86%), Positives = 52/58 (89%)
Frame = +2
Query: 254 RXKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALAANNS 427
R KIKMFAQQKVTLP GRHKI+ILDEADSMTDGAQQALRRTM +YS TTRFALA N S
Sbjct: 117 RNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNAS 174
Score = 96.7 bits (230), Expect = 4e-20
Identities = 43/56 (76%), Positives = 48/56 (85%)
Frame = +1
Query: 13 LPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL LAR
Sbjct: 36 LPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLAR 91
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +3
Query: 180 SLLGVSFKDAVLXLNASXDRGIDVV 254
+LLG + KDA+L LNAS DRGIDVV
Sbjct: 92 ALLGPALKDAMLELNASNDRGIDVV 116
Score = 33.5 bits (73), Expect = 0.43
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 426 VIEICNKENLSYTEEGVSAVVFTAQG 503
++ + KE + YT++G+ A++FTAQG
Sbjct: 202 LMNVIEKERVPYTDDGLEAIIFTAQG 227
>AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein.
Length = 354
Score = 103 bits (248), Expect = 3e-22
Identities = 50/58 (86%), Positives = 52/58 (89%)
Frame = +2
Query: 254 RXKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALAANNS 427
R KIKMFAQQKVTLP GRHKI+ILDEADSMTDGAQQALRRTM +YS TTRFALA N S
Sbjct: 117 RNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNAS 174
Score = 96.7 bits (230), Expect = 4e-20
Identities = 43/56 (76%), Positives = 48/56 (85%)
Frame = +1
Query: 13 LPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL LAR
Sbjct: 36 LPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLAR 91
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +3
Query: 180 SLLGVSFKDAVLXLNASXDRGIDVV 254
+LLG + KDA+L LNAS DRGIDVV
Sbjct: 92 ALLGPALKDAMLELNASNDRGIDVV 116
Score = 33.5 bits (73), Expect = 0.43
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 426 VIEICNKENLSYTEEGVSAVVFTAQG 503
++ + KE + YT++G+ A++FTAQG
Sbjct: 202 LMNVIEKERVPYTDDGLEAIIFTAQG 227
>BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 96.7 bits (230), Expect = 4e-20
Identities = 43/56 (76%), Positives = 48/56 (85%)
Frame = +1
Query: 13 LPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL LAR
Sbjct: 36 LPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLAR 91
Score = 55.2 bits (127), Expect = 1e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +2
Query: 335 DSMTDGAQQALRRTMXLYSSTTRFALAANNS 427
DSMTDGAQQALRRTM +YS TTRFALA N S
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNAS 140
Score = 33.5 bits (73), Expect = 0.43
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 426 VIEICNKENLSYTEEGVSAVVFTAQG 503
++ + KE + YT++G+ A++FTAQG
Sbjct: 168 LMNVIEKERVPYTDDGLEAIIFTAQG 193
>BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 96.7 bits (230), Expect = 4e-20
Identities = 43/56 (76%), Positives = 48/56 (85%)
Frame = +1
Query: 13 LPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL LAR
Sbjct: 36 LPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLAR 91
Score = 55.2 bits (127), Expect = 1e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +2
Query: 335 DSMTDGAQQALRRTMXLYSSTTRFALAANNS 427
DSMTDGAQQALRRTM +YS TTRFALA N S
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNAS 140
Score = 33.5 bits (73), Expect = 0.43
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 426 VIEICNKENLSYTEEGVSAVVFTAQG 503
++ + KE + YT++G+ A++FTAQG
Sbjct: 168 LMNVIEKERVPYTDDGLEAIIFTAQG 193
>AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C
(activator 1) 2 (40kD) protein.
Length = 320
Score = 96.7 bits (230), Expect = 4e-20
Identities = 43/56 (76%), Positives = 48/56 (85%)
Frame = +1
Query: 13 LPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL LAR
Sbjct: 36 LPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLAR 91
Score = 55.2 bits (127), Expect = 1e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +2
Query: 335 DSMTDGAQQALRRTMXLYSSTTRFALAANNS 427
DSMTDGAQQALRRTM +YS TTRFALA N S
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNAS 140
Score = 33.5 bits (73), Expect = 0.43
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 426 VIEICNKENLSYTEEGVSAVVFTAQG 503
++ + KE + YT++G+ A++FTAQG
Sbjct: 168 LMNVIEKERVPYTDDGLEAIIFTAQG 193
>AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein.
Length = 320
Score = 96.7 bits (230), Expect = 4e-20
Identities = 43/56 (76%), Positives = 48/56 (85%)
Frame = +1
Query: 13 LPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
LPW+EKYRP ++IVGNEDTVSRL VFA+ GN PNIIIAGPPG GKTT+IL LAR
Sbjct: 36 LPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLAR 91
Score = 55.2 bits (127), Expect = 1e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +2
Query: 335 DSMTDGAQQALRRTMXLYSSTTRFALAANNS 427
DSMTDGAQQALRRTM +YS TTRFALA N S
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNAS 140
Score = 33.5 bits (73), Expect = 0.43
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 426 VIEICNKENLSYTEEGVSAVVFTAQG 503
++ + KE + YT++G+ A++FTAQG
Sbjct: 168 LMNVIEKERVPYTDDGLEAIIFTAQG 193
>L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-kDa
subunit protein.
Length = 340
Score = 72.1 bits (169), Expect = 1e-12
Identities = 28/60 (46%), Positives = 42/60 (70%)
Frame = +1
Query: 1 KSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
K NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GKT+TIL A+
Sbjct: 16 KIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAK 75
Score = 48.4 bits (110), Expect = 1e-05
Identities = 26/56 (46%), Positives = 32/56 (57%)
Frame = +2
Query: 254 RXKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALAAN 421
R I FA + G K+VILDEAD+MT AQ ALRR + ++ TRF L N
Sbjct: 102 RGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICN 156
>CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein.
Length = 340
Score = 72.1 bits (169), Expect = 1e-12
Identities = 28/60 (46%), Positives = 42/60 (70%)
Frame = +1
Query: 1 KSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
K NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GKT+TIL A+
Sbjct: 16 KIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAK 75
Score = 45.6 bits (103), Expect = 1e-04
Identities = 25/56 (44%), Positives = 31/56 (55%)
Frame = +2
Query: 254 RXKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALAAN 421
R I FA + G K+VILDEAD+MT AQ ALR + ++ TRF L N
Sbjct: 102 RGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRGVIEKFTENTRFCLICN 156
>BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 72.1 bits (169), Expect = 1e-12
Identities = 28/60 (46%), Positives = 42/60 (70%)
Frame = +1
Query: 1 KSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
K NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GKT+TIL A+
Sbjct: 16 KIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAK 75
Score = 48.4 bits (110), Expect = 1e-05
Identities = 26/56 (46%), Positives = 32/56 (57%)
Frame = +2
Query: 254 RXKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALAAN 421
R I FA + G K+VILDEAD+MT AQ ALRR + ++ TRF L N
Sbjct: 102 RGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICN 156
>BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 72.1 bits (169), Expect = 1e-12
Identities = 28/60 (46%), Positives = 42/60 (70%)
Frame = +1
Query: 1 KSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
K NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GKT+TIL A+
Sbjct: 16 KIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAK 75
Score = 48.4 bits (110), Expect = 1e-05
Identities = 26/56 (46%), Positives = 32/56 (57%)
Frame = +2
Query: 254 RXKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALAAN 421
R I FA + G K+VILDEAD+MT AQ ALRR + ++ TRF L N
Sbjct: 102 RGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICN 156
>AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 72.1 bits (169), Expect = 1e-12
Identities = 28/60 (46%), Positives = 42/60 (70%)
Frame = +1
Query: 1 KSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
K NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GKT+TIL A+
Sbjct: 16 KIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAK 75
Score = 48.4 bits (110), Expect = 1e-05
Identities = 26/56 (46%), Positives = 32/56 (57%)
Frame = +2
Query: 254 RXKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALAAN 421
R I FA + G K+VILDEAD+MT AQ ALRR + ++ TRF L N
Sbjct: 102 RGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICN 156
>AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5
isoform 1 variant protein.
Length = 351
Score = 72.1 bits (169), Expect = 1e-12
Identities = 28/60 (46%), Positives = 42/60 (70%)
Frame = +1
Query: 1 KSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
K NLPW+EKYRPQT +D++ ++D +S + F P++++ GPPG GKT+TIL A+
Sbjct: 30 KIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILACAK 89
Score = 48.4 bits (110), Expect = 1e-05
Identities = 26/56 (46%), Positives = 32/56 (57%)
Frame = +2
Query: 254 RXKIKMFAQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALAAN 421
R I FA + G K+VILDEAD+MT AQ ALRR + ++ TRF L N
Sbjct: 116 RGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICN 170
>M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-kDa
subunit protein.
Length = 363
Score = 62.5 bits (145), Expect = 8e-10
Identities = 26/60 (43%), Positives = 39/60 (65%)
Frame = +1
Query: 1 KSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
K+ +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TIL AR
Sbjct: 34 KAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAAR 93
Score = 56.0 bits (129), Expect = 7e-08
Identities = 35/62 (56%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Frame = +2
Query: 254 RXKIKMFAQQKVT------LPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALA 415
R K+K FAQ V+ P KIVILDEADSMT AQ ALRRTM S TTRF L
Sbjct: 120 REKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI 179
Query: 416 AN 421
N
Sbjct: 180 CN 181
>CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein.
Length = 363
Score = 62.5 bits (145), Expect = 8e-10
Identities = 26/60 (43%), Positives = 39/60 (65%)
Frame = +1
Query: 1 KSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
K+ +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TIL AR
Sbjct: 34 KAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAAR 93
Score = 56.0 bits (129), Expect = 7e-08
Identities = 35/62 (56%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Frame = +2
Query: 254 RXKIKMFAQQKVT------LPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALA 415
R K+K FAQ V+ P KIVILDEADSMT AQ ALRRTM S TTRF L
Sbjct: 120 REKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI 179
Query: 416 AN 421
N
Sbjct: 180 CN 181
>BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 62.5 bits (145), Expect = 8e-10
Identities = 26/60 (43%), Positives = 39/60 (65%)
Frame = +1
Query: 1 KSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
K+ +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TIL AR
Sbjct: 34 KAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAAR 93
Score = 56.0 bits (129), Expect = 7e-08
Identities = 35/62 (56%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Frame = +2
Query: 254 RXKIKMFAQQKVT------LPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALA 415
R K+K FAQ V+ P KIVILDEADSMT AQ ALRRTM S TTRF L
Sbjct: 120 REKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI 179
Query: 416 AN 421
N
Sbjct: 180 CN 181
>BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 62.5 bits (145), Expect = 8e-10
Identities = 26/60 (43%), Positives = 39/60 (65%)
Frame = +1
Query: 1 KSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
K+ +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TIL AR
Sbjct: 34 KAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAAR 93
Score = 56.0 bits (129), Expect = 7e-08
Identities = 35/62 (56%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Frame = +2
Query: 254 RXKIKMFAQQKVT------LPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALA 415
R K+K FAQ V+ P KIVILDEADSMT AQ ALRRTM S TTRF L
Sbjct: 120 REKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI 179
Query: 416 AN 421
N
Sbjct: 180 CN 181
>BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 62.5 bits (145), Expect = 8e-10
Identities = 26/60 (43%), Positives = 39/60 (65%)
Frame = +1
Query: 1 KSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
K+ +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TIL AR
Sbjct: 34 KAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAAR 93
Score = 56.0 bits (129), Expect = 7e-08
Identities = 35/62 (56%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Frame = +2
Query: 254 RXKIKMFAQQKVT------LPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALA 415
R K+K FAQ V+ P KIVILDEADSMT AQ ALRRTM S TTRF L
Sbjct: 120 REKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI 179
Query: 416 AN 421
N
Sbjct: 180 CN 181
>AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C
(activator 1) 4 (37kD) protein.
Length = 363
Score = 62.5 bits (145), Expect = 8e-10
Identities = 26/60 (43%), Positives = 39/60 (65%)
Frame = +1
Query: 1 KSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
K+ +PW+EKYRP+ D++ E+ V+ L + + PN++ GPPG GKT+TIL AR
Sbjct: 34 KAKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAAR 93
Score = 56.0 bits (129), Expect = 7e-08
Identities = 35/62 (56%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Frame = +2
Query: 254 RXKIKMFAQQKVT------LPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALA 415
R K+K FAQ V+ P KIVILDEADSMT AQ ALRRTM S TTRF L
Sbjct: 120 REKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI 179
Query: 416 AN 421
N
Sbjct: 180 CN 181
>L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-kDa
subunit protein.
Length = 356
Score = 44.0 bits (99), Expect = 3e-04
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +2
Query: 275 AQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALAANNS 427
+QQ T K+V+L E D +T AQ ALRRTM Y ST R L N++
Sbjct: 118 SQQLETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNST 168
Score = 43.2 bits (97), Expect = 5e-04
Identities = 16/54 (29%), Positives = 33/54 (61%)
Frame = +1
Query: 19 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+ + R
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILR 57
>BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 44.0 bits (99), Expect = 3e-04
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +2
Query: 275 AQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALAANNS 427
+QQ T K+V+L E D +T AQ ALRRTM Y ST R L N++
Sbjct: 118 SQQLETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNST 168
Score = 43.2 bits (97), Expect = 5e-04
Identities = 16/54 (29%), Positives = 33/54 (61%)
Frame = +1
Query: 19 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+ + R
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILR 57
>BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 44.0 bits (99), Expect = 3e-04
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +2
Query: 275 AQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALAANNS 427
+QQ T K+V+L E D +T AQ ALRRTM Y ST R L N++
Sbjct: 118 SQQLETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNST 168
Score = 43.2 bits (97), Expect = 5e-04
Identities = 16/54 (29%), Positives = 33/54 (61%)
Frame = +1
Query: 19 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+ + R
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILR 57
>AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 44.0 bits (99), Expect = 3e-04
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +2
Query: 275 AQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALAANNS 427
+QQ T K+V+L E D +T AQ ALRRTM Y ST R L N++
Sbjct: 118 SQQLETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNST 168
Score = 43.2 bits (97), Expect = 5e-04
Identities = 16/54 (29%), Positives = 33/54 (61%)
Frame = +1
Query: 19 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+ + R
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILR 57
>AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3
isoform 1 variant protein.
Length = 356
Score = 44.0 bits (99), Expect = 3e-04
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +2
Query: 275 AQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALAANNS 427
+QQ T K+V+L E D +T AQ ALRRTM Y ST R L N++
Sbjct: 118 SQQLETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNST 168
Score = 43.2 bits (97), Expect = 5e-04
Identities = 16/54 (29%), Positives = 33/54 (61%)
Frame = +1
Query: 19 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+ + R
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILR 57
>AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C
(activator 1) 3 (38kD) protein.
Length = 356
Score = 44.0 bits (99), Expect = 3e-04
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +2
Query: 275 AQQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMXLYSSTTRFALAANNS 427
+QQ T K+V+L E D +T AQ ALRRTM Y ST R L N++
Sbjct: 118 SQQLETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNST 168
Score = 43.2 bits (97), Expect = 5e-04
Identities = 16/54 (29%), Positives = 33/54 (61%)
Frame = +1
Query: 19 WIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
W++KYRP + + +++ ++L + G+ P++++ GP G GK T I+ + R
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILR 57
>BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein
protein.
Length = 670
Score = 43.2 bits (97), Expect = 5e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +1
Query: 4 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 159
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 160 TILXLAR 180
T+ L++
Sbjct: 135 TLKILSK 141
>BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 43.2 bits (97), Expect = 5e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +1
Query: 4 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 159
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 160 TILXLAR 180
T+ L++
Sbjct: 135 TLKILSK 141
>AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 43.2 bits (97), Expect = 5e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +1
Query: 4 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 159
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 160 TILXLAR 180
T+ L++
Sbjct: 135 TLKILSK 141
>AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein.
Length = 670
Score = 43.2 bits (97), Expect = 5e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +1
Query: 4 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 159
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 160 TILXLAR 180
T+ L++
Sbjct: 135 TLKILSK 141
>AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 43.2 bits (97), Expect = 5e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +1
Query: 4 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 159
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 160 TILXLAR 180
T+ L++
Sbjct: 135 TLKILSK 141
>AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 43.2 bits (97), Expect = 5e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +1
Query: 4 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 159
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 160 TILXLAR 180
T+ L++
Sbjct: 135 TLKILSK 141
>AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 43.2 bits (97), Expect = 5e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +1
Query: 4 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 159
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 160 TILXLAR 180
T+ L++
Sbjct: 135 TLKILSK 141
>AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein.
Length = 670
Score = 43.2 bits (97), Expect = 5e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +1
Query: 4 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 159
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 160 TILXLAR 180
T+ L++
Sbjct: 135 TLKILSK 141
>AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolog
protein.
Length = 681
Score = 43.2 bits (97), Expect = 5e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +1
Query: 4 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 159
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 86 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 145
Query: 160 TILXLAR 180
T+ L++
Sbjct: 146 TLKILSK 152
>AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein
protein.
Length = 670
Score = 43.2 bits (97), Expect = 5e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +1
Query: 4 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 159
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 160 TILXLAR 180
T+ L++
Sbjct: 135 TLKILSK 141
>AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint
protein RAD17 protein.
Length = 670
Score = 43.2 bits (97), Expect = 5e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Frame = +1
Query: 4 STNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG---NAPN-----IIIAGPPGVGKTT 159
S N PW++KY+P+T ++ ++ + + + K P ++I GPPG GKTT
Sbjct: 75 SENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQGGSILLITGPPGCGKTT 134
Query: 160 TILXLAR 180
T+ L++
Sbjct: 135 TLKILSK 141
>BC018923-1|AAH18923.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 39.1 bits (87), Expect = 0.009
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 16 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILXLARVS 186
P + RP T D G V + L +T P++I+ GPPG GKTT +A S
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASNS 285
Query: 187 SEY 195
++
Sbjct: 286 KKH 288
>AL139092-4|CAH73665.1| 445|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 445
Score = 39.1 bits (87), Expect = 0.009
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 16 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILXLARVS 186
P + RP T D G V + L +T P++I+ GPPG GKTT +A S
Sbjct: 6 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASNS 65
Query: 187 SEY 195
++
Sbjct: 66 KKH 68
>AL139092-3|CAH73664.1| 665|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 665
Score = 39.1 bits (87), Expect = 0.009
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 16 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILXLARVS 186
P + RP T D G V + L +T P++I+ GPPG GKTT +A S
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASNS 285
Query: 187 SEY 195
++
Sbjct: 286 KKH 288
>AL139092-2|CAH73663.1| 640|Homo sapiens Werner helicase
interacting protein 1 protein.
Length = 640
Score = 39.1 bits (87), Expect = 0.009
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 16 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILXLARVS 186
P + RP T D G V + L +T P++I+ GPPG GKTT +A S
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASNS 285
Query: 187 SEY 195
++
Sbjct: 286 KKH 288
>AK223593-1|BAD97313.1| 665|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 665
Score = 39.1 bits (87), Expect = 0.009
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 16 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILXLARVS 186
P + RP T D G V + L +T P++I+ GPPG GKTT +A S
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASNS 285
Query: 187 SEY 195
++
Sbjct: 286 KKH 288
>AF218313-1|AAF80563.1| 445|Homo sapiens putative helicase RUVBL
protein.
Length = 445
Score = 39.1 bits (87), Expect = 0.009
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 16 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILXLARVS 186
P + RP T D G V + L +T P++I+ GPPG GKTT +A S
Sbjct: 6 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASNS 65
Query: 187 SEY 195
++
Sbjct: 66 KKH 68
>AB209723-1|BAD92960.1| 646|Homo sapiens Werner helicase
interacting protein isoform 1 variant protein.
Length = 646
Score = 39.1 bits (87), Expect = 0.009
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 16 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILXLARVS 186
P + RP T D G V + L +T P++I+ GPPG GKTT +A S
Sbjct: 207 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASNS 266
Query: 187 SEY 195
++
Sbjct: 267 KKH 269
>AB056152-1|BAB60709.1| 665|Homo sapiens Werner helicase
interacting protein protein.
Length = 665
Score = 36.3 bits (80), Expect = 0.061
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +1
Query: 16 PWIEKYRPQTFDDIVGNEDTVSR---LAVFAKTGNAPNIIIAGPPGVGKTTTILXLARVS 186
P + RP T D G V + L +T P++ + GPPG GKTT +A S
Sbjct: 226 PLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLNLWGPPGCGKTTLAHIIASNS 285
Query: 187 SEY 195
++
Sbjct: 286 KKH 288
>AY072792-1|AAL68396.1| 994|Homo sapiens PAAD and NACHT-containing
protein 2 protein.
Length = 994
Score = 33.9 bits (74), Expect = 0.32
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 46 FDDIVGNE--DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILXLARVSSE 192
F++ V E D + RL +TG P +II GP G+GKTT ++ L S+
Sbjct: 123 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMAWSD 174
>AK056688-1|BAB71254.1| 919|Homo sapiens protein ( Homo sapiens
cDNA FLJ32126 fis, clone PEBLM2000112, weakly similar to
Homo sapiens nucleotide-binding site protein 1 mRNA. ).
Length = 919
Score = 33.9 bits (74), Expect = 0.32
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 46 FDDIVGNE--DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILXLARVSSE 192
F++ V E D + RL +TG P +II GP G+GKTT ++ L S+
Sbjct: 48 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMAWSD 99
>AF482706-1|AAL88672.1| 916|Homo sapiens ribonuclease inhibitor 2
protein.
Length = 916
Score = 33.9 bits (74), Expect = 0.32
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 46 FDDIVGNE--DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILXLARVSSE 192
F++ V E D + RL +TG P +II GP G+GKTT ++ L S+
Sbjct: 45 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMAWSD 96
>AF479747-1|AAL87104.1| 994|Homo sapiens PYRIN-containing
APAF1-like protein 4 protein.
Length = 994
Score = 33.9 bits (74), Expect = 0.32
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 46 FDDIVGNE--DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILXLARVSSE 192
F++ V E D + RL +TG P +II GP G+GKTT ++ L S+
Sbjct: 123 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMAWSD 174
>AF442488-1|AAL35293.1| 994|Homo sapiens NALP4 protein.
Length = 994
Score = 33.9 bits (74), Expect = 0.32
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 46 FDDIVGNE--DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILXLARVSSE 192
F++ V E D + RL +TG P +II GP G+GKTT ++ L S+
Sbjct: 123 FEEEVKQEECDHLDRLFAPKETGKQPRTVIIQGPQGIGKTTLLMKLMMAWSD 174
>AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility
associated gene 1 protein.
Length = 1844
Score = 33.5 bits (73), Expect = 0.43
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 19 WIEKYRPQTFDDIVGNEDTVSRLAVFAK 102
W EKY+PQT +++GNE + +L + K
Sbjct: 1054 WTEKYQPQTASELIGNELAIKKLHSWLK 1081
>AK022797-1|BAB14248.1| 801|Homo sapiens protein ( Homo sapiens
cDNA FLJ12735 fis, clone NT2RP2000258, weakly similar to
ACTIVATOR 1 140 KD SUBUNIT. ).
Length = 801
Score = 33.5 bits (73), Expect = 0.43
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 19 WIEKYRPQTFDDIVGNEDTVSRLAVFAK 102
W EKY+PQT +++GNE + +L + K
Sbjct: 651 WTEKYQPQTASELIGNELAIKKLHSWLK 678
>AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 1844
Score = 33.5 bits (73), Expect = 0.43
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 19 WIEKYRPQTFDDIVGNEDTVSRLAVFAK 102
W EKY+PQT +++GNE + +L + K
Sbjct: 1054 WTEKYQPQTASELIGNELAIKKLHSWLK 1081
>L24544-1|AAA70430.1| 993|Homo sapiens DNA helicase protein.
Length = 993
Score = 31.9 bits (69), Expect = 1.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 70 DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXL 174
DT + AV II GPPG GKTTT++ +
Sbjct: 193 DTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEI 227
>BC050326-1|AAH50326.1| 994|Homo sapiens NLR family, pyrin domain
containing 4 protein.
Length = 994
Score = 31.9 bits (69), Expect = 1.3
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +1
Query: 46 FDDIVGNE--DTVSRLAVFAKTGNAPN-IIIAGPPGVGKTTTILXLARVSSE 192
F++ V E D + RL + G P +II GP G+GKTT ++ L S+
Sbjct: 123 FEEEVKQEECDHLDRLFAPKEAGKQPRTVIIQGPQGIGKTTLLMKLMMAWSD 174
>BC025299-1|AAH25299.1| 868|Homo sapiens Unknown (protein for
IMAGE:4890919) protein.
Length = 868
Score = 31.9 bits (69), Expect = 1.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 70 DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXL 174
DT + AV II GPPG GKTTT++ +
Sbjct: 193 DTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEI 227
>L14754-1|AAA53082.1| 993|Homo sapiens DNA-binding protein protein.
Length = 993
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 70 DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXL 174
DT + AV II GPPG GKTTT++ +
Sbjct: 193 DTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEI 227
>BC105090-1|AAI05091.1| 993|Homo sapiens immunoglobulin mu binding
protein 2 protein.
Length = 993
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 70 DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXL 174
DT + AV II GPPG GKTTT++ +
Sbjct: 193 DTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEI 227
>BC105088-1|AAI05089.1| 993|Homo sapiens immunoglobulin mu binding
protein 2 protein.
Length = 993
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 70 DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXL 174
DT + AV II GPPG GKTTT++ +
Sbjct: 193 DTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEI 227
>BC050576-1|AAH50576.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 109 NAPNIIIAGPPGVGKTTTILXLAR 180
N P I+I GPP GKTT + L +
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCK 79
>BC034776-1|AAH34776.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 109 NAPNIIIAGPPGVGKTTTILXLAR 180
N P I+I GPP GKTT + L +
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCK 79
>BC000290-1|AAH00290.1| 868|Homo sapiens IGHMBP2 protein protein.
Length = 868
Score = 31.1 bits (67), Expect = 2.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 70 DTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILXL 174
DT + AV II GPPG GKTTT++ +
Sbjct: 193 DTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEI 227
>AL445645-1|CAH72109.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 109 NAPNIIIAGPPGVGKTTTILXLAR 180
N P I+I GPP GKTT + L +
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCK 79
>AL160165-5|CAH70535.1| 479|Homo sapiens chromosome 9 open reading
frame 98 protein.
Length = 479
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 109 NAPNIIIAGPPGVGKTTTILXLAR 180
N P I+I GPP GKTT + L +
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCK 79
>AK057266-1|BAB71402.1| 479|Homo sapiens protein ( Homo sapiens
cDNA FLJ32704 fis, clone TESTI2000591, weakly similar to
ADENYLATE KINASE, CHLOROPLAST (EC 2.7.4.3). ).
Length = 479
Score = 31.1 bits (67), Expect = 2.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 109 NAPNIIIAGPPGVGKTTTILXLAR 180
N P I+I GPP GKTT + L +
Sbjct: 56 NVPRIVILGPPASGKTTIAMWLCK 79
>Y18418-1|CAB46271.1| 456|Homo sapiens erythrocyte cytosolic
protein of 54 kDa, ECP-54 protein.
Length = 456
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 121 IIIAGPPGVGKTTTILXLARVSSEYLSKTPY 213
+++AGPPG GKT L +A+ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>DQ469310-1|ABF13334.1| 386|Homo sapiens RUVBL1-FK protein.
Length = 386
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 121 IIIAGPPGVGKTTTILXLARVSSEYLSKTPY 213
+++AGPPG GKT L +A+ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>BT007057-1|AAP35706.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 121 IIIAGPPGVGKTTTILXLARVSSEYLSKTPY 213
+++AGPPG GKT L +A+ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>BC012886-1|AAH12886.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 121 IIIAGPPGVGKTTTILXLARVSSEYLSKTPY 213
+++AGPPG GKT L +A+ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>BC007426-1|AAH07426.1| 172|Homo sapiens TAF9 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 32kDa
protein.
Length = 172
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 115 PNIIIAGPPGVGKTTTILXLARVS 186
PNI++ G PGVGKTT LA S
Sbjct: 4 PNILLTGTPGVGKTTLGKELASKS 27
>BC007349-1|AAH07349.1| 172|Homo sapiens TAF9 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 32kDa
protein.
Length = 172
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 115 PNIIIAGPPGVGKTTTILXLARVS 186
PNI++ G PGVGKTT LA S
Sbjct: 4 PNILLTGTPGVGKTTLGKELASKS 27
>BC002993-1|AAH02993.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 121 IIIAGPPGVGKTTTILXLARVSSEYLSKTPY 213
+++AGPPG GKT L +A+ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associated
5-like 1 protein.
Length = 753
Score = 30.3 bits (65), Expect = 4.0
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 121 IIIAGPPGVGKTTTILXLAR 180
+++AGPPGVGKT + +AR
Sbjct: 237 VLLAGPPGVGKTQLVQAVAR 256
>AK222575-1|BAD96295.1| 456|Homo sapiens TATA binding protein
interacting protein 49 kDa variant protein.
Length = 456
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 121 IIIAGPPGVGKTTTILXLARVSSEYLSKTPY 213
+++AGPPG GKT L +A+ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>AK222563-1|BAD96283.1| 456|Homo sapiens TATA binding protein
interacting protein 49 kDa variant protein.
Length = 456
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 121 IIIAGPPGVGKTTTILXLARVSSEYLSKTPY 213
+++AGPPG GKT L +A+ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens
cDNA FLJ13170 fis, clone NT2RP3003809, weakly similar to
SAV PROTEIN. ).
Length = 620
Score = 30.3 bits (65), Expect = 4.0
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 121 IIIAGPPGVGKTTTILXLAR 180
+++AGPPGVGKT + +AR
Sbjct: 237 VLLAGPPGVGKTQLVQAVAR 256
>AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ12286 fis, clone MAMMA1001768, weakly similar to
CELL DIVISION CYCLE PROTEIN 48 HOMOLOG MJ1156. ).
Length = 392
Score = 30.3 bits (65), Expect = 4.0
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 121 IIIAGPPGVGKTTTILXLAR 180
+++AGPPGVGKT + +AR
Sbjct: 237 VLLAGPPGVGKTQLVQAVAR 256
>AJ878881-1|CAI48031.1| 172|Homo sapiens coilin-interacting nulcear
ATPase protein protein.
Length = 172
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 115 PNIIIAGPPGVGKTTTILXLARVS 186
PNI++ G PGVGKTT LA S
Sbjct: 4 PNILLTGTPGVGKTTLGKELASKS 27
>AJ878880-1|CAI48030.1| 172|Homo sapiens coilin-interacting nuclear
ATPase protein protein.
Length = 172
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 115 PNIIIAGPPGVGKTTTILXLARVS 186
PNI++ G PGVGKTT LA S
Sbjct: 4 PNILLTGTPGVGKTTLGKELASKS 27
>AJ010058-1|CAA08986.1| 456|Homo sapiens Nuclear matrix protein
NMP238 protein.
Length = 456
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 121 IIIAGPPGVGKTTTILXLARVSSEYLSKTPY 213
+++AGPPG GKT L +A+ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>AF380344-1|AAM45570.1| 456|Homo sapiens pontin 52 protein.
Length = 456
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 121 IIIAGPPGVGKTTTILXLARVSSEYLSKTPY 213
+++AGPPG GKT L +A+ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>AF151895-1|AAD34132.1| 172|Homo sapiens CGI-137 protein protein.
Length = 172
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 115 PNIIIAGPPGVGKTTTILXLARVS 186
PNI++ G PGVGKTT LA S
Sbjct: 4 PNILLTGTPGVGKTTLGKELASKS 27
>AF110777-1|AAF14860.1| 172|Homo sapiens adrenal gland protein
AD-004 protein.
Length = 172
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 115 PNIIIAGPPGVGKTTTILXLARVS 186
PNI++ G PGVGKTT LA S
Sbjct: 4 PNILLTGTPGVGKTTLGKELASKS 27
>AF099084-1|AAD04427.1| 456|Homo sapiens Pontin52 protein.
Length = 456
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 121 IIIAGPPGVGKTTTILXLARVSSEYLSKTPY 213
+++AGPPG GKT L +A+ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>AF098534-1|AAC97951.1| 584|Homo sapiens RAD17 isoform 4 protein.
Length = 584
Score = 30.3 bits (65), Expect = 4.0
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 121 IIIAGPPGVGKTTTILXLAR 180
++I GPPG GKTTT+ L++
Sbjct: 36 LLITGPPGCGKTTTLKILSK 55
>AF070735-1|AAC77819.1| 456|Homo sapiens RuvB-like protein RUVBL1
protein.
Length = 456
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 121 IIIAGPPGVGKTTTILXLARVSSEYLSKTPY 213
+++AGPPG GKT L +A+ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>AB012122-1|BAA28169.1| 456|Homo sapiens TIP49 protein.
Length = 456
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 121 IIIAGPPGVGKTTTILXLARVSSEYLSKTPY 213
+++AGPPG GKT L +A+ E SK P+
Sbjct: 66 VLLAGPPGTGKTALALAIAQ---ELGSKVPF 93
>D42046-1|BAA07647.1| 1077|Homo sapiens KIAA0083 protein.
Length = 1077
Score = 29.5 bits (63), Expect = 7.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 124 IIAGPPGVGKTTTILXLARV 183
+I G PG GKTTTI L R+
Sbjct: 662 LIVGMPGTGKTTTICTLVRI 681
>BC053574-1|AAH53574.1| 494|Homo sapiens DNA2L protein protein.
Length = 494
Score = 29.5 bits (63), Expect = 7.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 124 IIAGPPGVGKTTTILXLARV 183
+I G PG GKTTTI L R+
Sbjct: 79 LIVGMPGTGKTTTICTLVRI 98
>BC041115-1|AAH41115.1| 435|Homo sapiens DNA2L protein protein.
Length = 435
Score = 29.5 bits (63), Expect = 7.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 124 IIAGPPGVGKTTTILXLARV 183
+I G PG GKTTTI L R+
Sbjct: 20 LIVGMPGTGKTTTICTLVRI 39
>BC009312-1|AAH09312.1| 1003|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 1003
Score = 29.5 bits (63), Expect = 7.0
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 82 RLAVFAKTGNAPNIIIAGPPGVGKTTTILXLARVSSEYLSK 204
R V T AP II GPPG GKT T++ + ++L K
Sbjct: 508 RHIVTGTTRPAPYIIF-GPPGTGKTVTLVEAIKQVVKHLPK 547
>BC004499-1|AAH04499.2| 601|Homo sapiens MOV10 protein protein.
Length = 601
Score = 29.5 bits (63), Expect = 7.0
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 82 RLAVFAKTGNAPNIIIAGPPGVGKTTTILXLARVSSEYLSK 204
R V T AP II GPPG GKT T++ + ++L K
Sbjct: 106 RHIVTGTTRPAPYIIF-GPPGTGKTVTLVEAIKQVVKHLPK 145
>BC002548-1|AAH02548.1| 1003|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 1003
Score = 29.5 bits (63), Expect = 7.0
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 82 RLAVFAKTGNAPNIIIAGPPGVGKTTTILXLARVSSEYLSK 204
R V T AP II GPPG GKT T++ + ++L K
Sbjct: 508 RHIVTGTTRPAPYIIF-GPPGTGKTVTLVEAIKQVVKHLPK 547
>AY682080-1|AAT74625.1| 4646|Homo sapiens dynein, cytoplasmic, heavy
polypeptide 1 protein.
Length = 4646
Score = 29.5 bits (63), Expect = 7.0
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 22 IEKYRPQTFDDIVGNEDTVSRLAV-FAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
+E ++ D +V DTV A+ + +++ GPPG GKT T+ R
Sbjct: 2557 VETHKVAAPDVVVPTLDTVRHEALLYTWLAEHKPLVLCGPPGSGKTMTLFSALR 2610
>AL603832-3|CAI14056.1| 947|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 947
Score = 29.5 bits (63), Expect = 7.0
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 82 RLAVFAKTGNAPNIIIAGPPGVGKTTTILXLARVSSEYLSK 204
R V T AP II GPPG GKT T++ + ++L K
Sbjct: 452 RHIVTGTTRPAPYIIF-GPPGTGKTVTLVEAIKQVVKHLPK 491
>AL603832-2|CAI14055.1| 1003|Homo sapiens Mov10, Moloney leukemia
virus 10, homolog (mouse) protein.
Length = 1003
Score = 29.5 bits (63), Expect = 7.0
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 82 RLAVFAKTGNAPNIIIAGPPGVGKTTTILXLARVSSEYLSK 204
R V T AP II GPPG GKT T++ + ++L K
Sbjct: 508 RHIVTGTTRPAPYIIF-GPPGTGKTVTLVEAIKQVVKHLPK 547
>AL136233-5|CAI17238.1| 1040|Homo sapiens DNA2 DNA replication
helicase 2-like (yeast) protein.
Length = 1040
Score = 29.5 bits (63), Expect = 7.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 124 IIAGPPGVGKTTTILXLARV 183
+I G PG GKTTTI L R+
Sbjct: 645 LIVGMPGTGKTTTICTLVRI 664
>AK074174-1|BAB85000.1| 925|Homo sapiens FLJ00247 protein protein.
Length = 925
Score = 29.5 bits (63), Expect = 7.0
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 82 RLAVFAKTGNAPNIIIAGPPGVGKTTTILXLARVSSEYLSK 204
R V T AP II GPPG GKT T++ + ++L K
Sbjct: 533 RHIVTGTTRPAPYIIF-GPPGTGKTVTLVEAIKQVVKHLPK 572
>AB046851-1|BAB13457.1| 1032|Homo sapiens KIAA1631 protein protein.
Length = 1032
Score = 29.5 bits (63), Expect = 7.0
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 82 RLAVFAKTGNAPNIIIAGPPGVGKTTTILXLARVSSEYLSK 204
R V T AP II GPPG GKT T++ + ++L K
Sbjct: 537 RHIVTGTTRPAPYIIF-GPPGTGKTVTLVEAIKQVVKHLPK 576
>AB002323-1|BAA20783.3| 4658|Homo sapiens KIAA0325 protein protein.
Length = 4658
Score = 29.5 bits (63), Expect = 7.0
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 22 IEKYRPQTFDDIVGNEDTVSRLAV-FAKTGNAPNIIIAGPPGVGKTTTILXLAR 180
+E ++ D +V DTV A+ + +++ GPPG GKT T+ R
Sbjct: 2569 VETHKVAAPDVVVPTLDTVRHEALLYTWLAEHKPLVLCGPPGSGKTMTLFSALR 2622
>BC035132-1|AAH35132.1| 743|Homo sapiens threonine synthase-like 1
(S. cerevisiae) protein.
Length = 743
Score = 29.1 bits (62), Expect = 9.2
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 118 NIIIAGPPGVGKTT 159
NII+ GPPG GKTT
Sbjct: 57 NIILMGPPGAGKTT 70
>BC005102-1|AAH05102.1| 190|Homo sapiens chromosome 1 open reading
frame 57 protein.
Length = 190
Score = 29.1 bits (62), Expect = 9.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 112 APNIIIAGPPGVGKTTTI 165
A ++ + GPPGVGKTT I
Sbjct: 2 ARHVFLTGPPGVGKTTLI 19
>AL512598-6|CAH70791.1| 743|Homo sapiens threonine synthase-like 1
(bacterial) protein.
Length = 743
Score = 29.1 bits (62), Expect = 9.2
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 118 NIIIAGPPGVGKTT 159
NII+ GPPG GKTT
Sbjct: 57 NIILMGPPGAGKTT 70
>AL122003-5|CAI22244.1| 190|Homo sapiens chromosome 1 open reading
frame 57 protein.
Length = 190
Score = 29.1 bits (62), Expect = 9.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 112 APNIIIAGPPGVGKTTTI 165
A ++ + GPPGVGKTT I
Sbjct: 2 ARHVFLTGPPGVGKTTLI 19
>AL122003-4|CAI22243.1| 228|Homo sapiens chromosome 1 open reading
frame 57 protein.
Length = 228
Score = 29.1 bits (62), Expect = 9.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 112 APNIIIAGPPGVGKTTTI 165
A ++ + GPPGVGKTT I
Sbjct: 2 ARHVFLTGPPGVGKTTLI 19
>AF416713-1|AAL16807.1| 190|Homo sapiens unknown protein.
Length = 190
Score = 29.1 bits (62), Expect = 9.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 112 APNIIIAGPPGVGKTTTI 165
A ++ + GPPGVGKTT I
Sbjct: 2 ARHVFLTGPPGVGKTTLI 19
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,686,014
Number of Sequences: 237096
Number of extensions: 1152570
Number of successful extensions: 3411
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 3179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3400
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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