Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30336
         (562 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding pr...    25   2.2  
AF457550-1|AAL68780.1|   92|Anopheles gambiae antigen 5-related ...    24   3.0  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   6.8  

>AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding
           protein AgamOBP53 protein.
          Length = 171

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -2

Query: 558 FFFFLLLRCVDQLTIHLCEVVTGAHRHLQRNCAPLTLRY 442
           F  + ++ C+ Q  +   EV+ G   HL++   PLT ++
Sbjct: 59  FQAYFVVNCLAQCQLEELEVIDGEELHLEK-LYPLTAKF 96


>AF457550-1|AAL68780.1|   92|Anopheles gambiae antigen 5-related 3
           protein protein.
          Length = 92

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -1

Query: 448 KI*ALRSQYSYNGCPALQTETHYCFTAVIG 359
           KI    SQ+  NG P L    +Y FT ++G
Sbjct: 28  KIGCAISQWPENGNPYLYLVCNYSFTDIVG 57


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -1

Query: 295 QLIEDVLNHSSRTMREGLPKIAEVRFKLYSRFSSXR 188
           +L+ED    + +T+     K+AEV+ K   + S+ R
Sbjct: 751 RLLEDAYQSAKKTLANVEKKLAEVKAKSSDKNSTAR 786


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,601
Number of Sequences: 2352
Number of extensions: 9950
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)