SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30336
         (562 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023946-1|ABB36450.1| 2106|Drosophila melanogaster LD32003p pro...    91   9e-19
BT023795-1|AAZ41804.1| 2154|Drosophila melanogaster GH08786p pro...    91   9e-19
AE014297-689|AAF54180.1| 2117|Drosophila melanogaster CG2747-PB,...    91   9e-19
AE014297-688|AAG22133.2| 2165|Drosophila melanogaster CG2747-PA,...    91   9e-19
AY121620-1|AAM51947.1| 1353|Drosophila melanogaster GH06739p pro...    29   5.7  
AE013599-2803|AAF57611.2| 1353|Drosophila melanogaster CG15105-P...    29   5.7  
AE013599-2802|AAF57612.2| 1353|Drosophila melanogaster CG15105-P...    29   5.7  
BT001682-1|AAN71437.1|  355|Drosophila melanogaster RE56202p pro...    28   9.9  
AF113847-1|AAD37500.1| 2151|Drosophila melanogaster kismet protein.    28   9.9  
AE013599-2541|AAF57808.2|  355|Drosophila melanogaster CG10933-P...    28   9.9  

>BT023946-1|ABB36450.1| 2106|Drosophila melanogaster LD32003p protein.
          Length = 2106

 Score = 91.1 bits (216), Expect = 9e-19
 Identities = 47/80 (58%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
 Frame = +2

Query: 5    RTLHDFALQWLTKIGPKYPQEFKTMMQQSSELRNKLESALKS-SQSGNRSGRPTQQQRPV 181
            R LHD ALQWL KIGPKYPQEFK +M Q+ ELR KLE+A++S  QS N + + ++ QR +
Sbjct: 2028 RQLHDQALQWLLKIGPKYPQEFKALMGQTPELRQKLEAAIRSQQQSINIAQKASEAQRNL 2087

Query: 182  FDAXRAKPTIQLKTDFSDFR 241
              A   KPTI+LKTDFS+F+
Sbjct: 2088 L-AKPQKPTIKLKTDFSNFQ 2106


>BT023795-1|AAZ41804.1| 2154|Drosophila melanogaster GH08786p protein.
          Length = 2154

 Score = 91.1 bits (216), Expect = 9e-19
 Identities = 47/80 (58%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
 Frame = +2

Query: 5    RTLHDFALQWLTKIGPKYPQEFKTMMQQSSELRNKLESALKS-SQSGNRSGRPTQQQRPV 181
            R LHD ALQWL KIGPKYPQEFK +M Q+ ELR KLE+A++S  QS N + + ++ QR +
Sbjct: 2076 RQLHDQALQWLLKIGPKYPQEFKALMGQTPELRQKLEAAIRSQQQSINIAQKASEAQRNL 2135

Query: 182  FDAXRAKPTIQLKTDFSDFR 241
              A   KPTI+LKTDFS+F+
Sbjct: 2136 L-AKPQKPTIKLKTDFSNFQ 2154


>AE014297-689|AAF54180.1| 2117|Drosophila melanogaster CG2747-PB,
            isoform B protein.
          Length = 2117

 Score = 91.1 bits (216), Expect = 9e-19
 Identities = 47/80 (58%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
 Frame = +2

Query: 5    RTLHDFALQWLTKIGPKYPQEFKTMMQQSSELRNKLESALKS-SQSGNRSGRPTQQQRPV 181
            R LHD ALQWL KIGPKYPQEFK +M Q+ ELR KLE+A++S  QS N + + ++ QR +
Sbjct: 2039 RQLHDQALQWLLKIGPKYPQEFKALMGQTPELRQKLEAAIRSQQQSINIAQKASEAQRNL 2098

Query: 182  FDAXRAKPTIQLKTDFSDFR 241
              A   KPTI+LKTDFS+F+
Sbjct: 2099 L-AKPQKPTIKLKTDFSNFQ 2117


>AE014297-688|AAG22133.2| 2165|Drosophila melanogaster CG2747-PA,
            isoform A protein.
          Length = 2165

 Score = 91.1 bits (216), Expect = 9e-19
 Identities = 47/80 (58%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
 Frame = +2

Query: 5    RTLHDFALQWLTKIGPKYPQEFKTMMQQSSELRNKLESALKS-SQSGNRSGRPTQQQRPV 181
            R LHD ALQWL KIGPKYPQEFK +M Q+ ELR KLE+A++S  QS N + + ++ QR +
Sbjct: 2087 RQLHDQALQWLLKIGPKYPQEFKALMGQTPELRQKLEAAIRSQQQSINIAQKASEAQRNL 2146

Query: 182  FDAXRAKPTIQLKTDFSDFR 241
              A   KPTI+LKTDFS+F+
Sbjct: 2147 L-AKPQKPTIKLKTDFSNFQ 2165


>AY121620-1|AAM51947.1| 1353|Drosophila melanogaster GH06739p protein.
          Length = 1353

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 356  GGGTYPCGLTRGPQ*KVIILTANRRRFESFESN 258
            G  T+P GL  GP   +++  ++  R + F+SN
Sbjct: 1089 GSFTWPRGLAVGPDNSIVVADSSNHRVQVFDSN 1121


>AE013599-2803|AAF57611.2| 1353|Drosophila melanogaster CG15105-PB,
            isoform B protein.
          Length = 1353

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 356  GGGTYPCGLTRGPQ*KVIILTANRRRFESFESN 258
            G  T+P GL  GP   +++  ++  R + F+SN
Sbjct: 1089 GSFTWPRGLAVGPDNSIVVADSSNHRVQVFDSN 1121


>AE013599-2802|AAF57612.2| 1353|Drosophila melanogaster CG15105-PA,
            isoform A protein.
          Length = 1353

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 356  GGGTYPCGLTRGPQ*KVIILTANRRRFESFESN 258
            G  T+P GL  GP   +++  ++  R + F+SN
Sbjct: 1089 GSFTWPRGLAVGPDNSIVVADSSNHRVQVFDSN 1121


>BT001682-1|AAN71437.1|  355|Drosophila melanogaster RE56202p
           protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 56  YPQEFKTMMQQSSELRNKLESALKSSQSGNRSGRPTQQQRP 178
           YP +   ++QQ     N +E+ L+  Q G +S    QQQ+P
Sbjct: 239 YPADSVRVLQQQKATLNAMETILQQGQQGQQS---QQQQQP 276


>AF113847-1|AAD37500.1| 2151|Drosophila melanogaster kismet protein.
          Length = 2151

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = +2

Query: 26   LQWLTK-----IGPKYPQEFKTMMQQSSELRNKLESALKSSQSGNRSGRP 160
            +QWLT+     + PK+ ++ +  M   S     +ESA  SS   +  GRP
Sbjct: 1231 MQWLTENPNYEVDPKWLEQMQNPMSTPSPRPASMESAYGSSAVKSHGGRP 1280


>AE013599-2541|AAF57808.2|  355|Drosophila melanogaster CG10933-PA
           protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 56  YPQEFKTMMQQSSELRNKLESALKSSQSGNRSGRPTQQQRP 178
           YP +   ++QQ     N +E+ L+  Q G +S    QQQ+P
Sbjct: 239 YPADSVRVLQQQKATLNAMETILQQGQQGQQS---QQQQQP 276


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,277,995
Number of Sequences: 53049
Number of extensions: 427097
Number of successful extensions: 1222
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -