Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30336
         (562 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr...    35   0.035
AC084152-4|AAR85899.1|  753|Caenorhabditis elegans Hypothetical ...    31   0.43 
AC084152-3|AAK39314.2|  772|Caenorhabditis elegans Hypothetical ...    31   0.43 
Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z73906-3|CAE45047.1|  470|Caenorhabditis elegans Hypothetical pr...    27   7.0  
Z73906-2|CAA98115.1|  586|Caenorhabditis elegans Hypothetical pr...    27   7.0  
Z92789-8|CAB07222.3|  495|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z68336-9|CAA92741.3|  495|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AC006720-7|AAF60444.1|  511|Caenorhabditis elegans Cytochrome p4...    27   9.2  

>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical protein
            C13F10.4 protein.
          Length = 2076

 Score = 35.1 bits (77), Expect = 0.035
 Identities = 15/40 (37%), Positives = 26/40 (65%)
 Frame = +2

Query: 5    RTLHDFALQWLTKIGPKYPQEFKTMMQQSSELRNKLESAL 124
            + LH+ A+  L      +P EFK +++ ++EL+ +LESAL
Sbjct: 1997 KKLHEMAIGRLNAAASMWPAEFKKVIEWNNELKTRLESAL 2036


>AC084152-4|AAR85899.1|  753|Caenorhabditis elegans Hypothetical
           protein Y102A11A.2b protein.
          Length = 753

 Score = 31.5 bits (68), Expect = 0.43
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +2

Query: 62  QEFKTMMQQSSELRNKLESALKSSQSGNRSGRPTQQQRPVFDAXR 196
           +EFK   +Q  E+R KLE+  K+ Q   R+ R  ++QR + +A +
Sbjct: 477 REFKNQKKQEEEIRAKLEAKKKAEQEKERAKR--EEQRRIEEAAK 519


>AC084152-3|AAK39314.2|  772|Caenorhabditis elegans Hypothetical
           protein Y102A11A.2a protein.
          Length = 772

 Score = 31.5 bits (68), Expect = 0.43
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +2

Query: 62  QEFKTMMQQSSELRNKLESALKSSQSGNRSGRPTQQQRPVFDAXR 196
           +EFK   +Q  E+R KLE+  K+ Q   R+ R  ++QR + +A +
Sbjct: 477 REFKNQKKQEEEIRAKLEAKKKAEQEKERAKR--EEQRRIEEAAK 519


>Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical
           protein C54D10.7 protein.
          Length = 1144

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +2

Query: 29  QWLT-KIGPKYPQEFKTMMQQSSELRNKLES 118
           QW T  +GP+Y   FKT +   +   NKLES
Sbjct: 629 QWHTASLGPQYCTVFKTFLTDMNNFLNKLES 659


>Z73906-3|CAE45047.1|  470|Caenorhabditis elegans Hypothetical
           protein D2030.2b protein.
          Length = 470

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 18/53 (33%), Positives = 22/53 (41%)
 Frame = +2

Query: 47  GPKYPQEFKTMMQQSSELRNKLESALKSSQSGNRSGRPTQQQRPVFDAXRAKP 205
           G  Y  E +     SSELRN    ++   QS N+   P Q  R      RA P
Sbjct: 83  GVFYQDELRLGQMASSELRN----SIMQQQSNNQPPSPAQSPRNAAPTFRALP 131


>Z73906-2|CAA98115.1|  586|Caenorhabditis elegans Hypothetical
           protein D2030.2a protein.
          Length = 586

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 18/53 (33%), Positives = 22/53 (41%)
 Frame = +2

Query: 47  GPKYPQEFKTMMQQSSELRNKLESALKSSQSGNRSGRPTQQQRPVFDAXRAKP 205
           G  Y  E +     SSELRN    ++   QS N+   P Q  R      RA P
Sbjct: 199 GVFYQDELRLGQMASSELRN----SIMQQQSNNQPPSPAQSPRNAAPTFRALP 247


>Z92789-8|CAB07222.3|  495|Caenorhabditis elegans Hypothetical
           protein H02I12.8 protein.
          Length = 495

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -2

Query: 534 CVDQLTIHLCEVVTGAHRHLQRNCAPLTLRYKL*GLSIVTTAAPPFRPKR 385
           C+   +  L E +  + +HL +  A + L   L G+SI+T+    +RPKR
Sbjct: 81  CLMLYSADLVEPIFSSTKHLNKGFAYVLLEPWL-GISILTSQKEQWRPKR 129


>Z68336-9|CAA92741.3|  495|Caenorhabditis elegans Hypothetical
           protein H02I12.8 protein.
          Length = 495

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -2

Query: 534 CVDQLTIHLCEVVTGAHRHLQRNCAPLTLRYKL*GLSIVTTAAPPFRPKR 385
           C+   +  L E +  + +HL +  A + L   L G+SI+T+    +RPKR
Sbjct: 81  CLMLYSADLVEPIFSSTKHLNKGFAYVLLEPWL-GISILTSQKEQWRPKR 129


>AC006720-7|AAF60444.1|  511|Caenorhabditis elegans Cytochrome p450
           family protein 31A3 protein.
          Length = 511

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -2

Query: 534 CVDQLTIHLCEVVTGAHRHLQRNCAPLTLRYKL*GLSIVTTAAPPFRPKR 385
           C+   +  L E +  + +HL +  A + L   L G+SI+T+    +RPKR
Sbjct: 81  CLMLYSADLVEPIFSSTKHLNKGFAYVLLEPWL-GISILTSQKEQWRPKR 129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,718,148
Number of Sequences: 27780
Number of extensions: 211448
Number of successful extensions: 497
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)