Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30335
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.4  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   9.8  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   9.8  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 366 KHQVDRQLESPINVIKKWHQTDTHTKP 286
           K  +D    S +N    WH TD+H+ P
Sbjct: 228 KRTLDGMAASKLNSFH-WHITDSHSFP 253


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 486 YCFTAEIGGW 515
           +C+  EIGGW
Sbjct: 134 WCWIVEIGGW 143


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 86  ITYCSNNTDMAFMTK 130
           +T C +NTD +F +K
Sbjct: 39  LTTCESNTDFSFGSK 53


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 650 CLSYFCLINYIH 685
           C  YFC+  YI+
Sbjct: 255 CSLYFCIFGYIY 266


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 650 CLSYFCLINYIH 685
           C  YFC+  YI+
Sbjct: 80  CSLYFCIFGYIY 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,597
Number of Sequences: 336
Number of extensions: 3278
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)