Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30332
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical p... 77 1e-14
AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical ... 29 1.9
AL021492-3|CAA16382.3| 893|Caenorhabditis elegans Hypothetical ... 29 2.5
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 29 3.3
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 29 3.3
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 3.3
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 3.3
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 29 3.3
Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical pr... 28 4.4
U40958-3|ABQ13075.1| 219|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 7.7
AF067608-10|AAC17650.1| 261|Caenorhabditis elegans Hypothetical... 27 7.7
>Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical
protein F25H2.11 protein.
Length = 181
Score = 76.6 bits (180), Expect = 1e-14
Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +1
Query: 61 MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEA--DEGT 234
M IYKDI T DE+ SD++ MKLVD+++YE G+ V R +G+I + G NPSAEE D+G+
Sbjct: 1 MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGS 60
Query: 235 DSAVESGL 258
D VE G+
Sbjct: 61 DEHVERGI 68
Score = 58.0 bits (134), Expect = 5e-09
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Frame = +3
Query: 255 VDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQ--VEVFKTNMNKVMKDI 428
+DIVLNH+LVE + D + Y+K +MK ++ +E+ D+ V+ FK + + +
Sbjct: 68 IDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSL 127
Query: 429 LG--RFKELQFFTGESM---DCDGMVAMMEYR 509
L RFK L FF GE +G VA++EYR
Sbjct: 128 LAKDRFKNLAFFIGERAAEGAENGQVAIIEYR 159
>AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical
protein F52F10.2 protein.
Length = 508
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 413 FVHVCFKYFNLVRRLLFQFCY*FFHI 336
F+++C +Y RR L FCY F I
Sbjct: 137 FIYLCIEYLPTGRRYLMMFCYILFDI 162
>AL021492-3|CAA16382.3| 893|Caenorhabditis elegans Hypothetical
protein Y45F10D.7 protein.
Length = 893
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = -3
Query: 294 RMFRLACGSGLCQPALDGRVRALVSLFSRRIKTLDLDITLCSRHQPTGHFVNNFIDQFHF 115
+MF+ G+C P + ALV++ +++ L T+C R V N ++ F
Sbjct: 505 KMFKKDVRLGICAPCPSNSLVALVAIAENGKESVILVDTVCHRVARAFETVGNKVNAMTF 564
Query: 114 VGVREHLITSDN 79
+ L+ +DN
Sbjct: 565 SSDGKWLLVADN 576
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 306 KKSYTLYLKDYMKKLVAKLEEK 371
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 306 KKSYTLYLKDYMKKLVAKLEEK 371
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 288 TYAFG--DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQ 452
T+ FG D++ Y++ +KD KKL + E+ + TN K + G+ K L+
Sbjct: 11103 TFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLK 11159
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 288 TYAFG--DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQ 452
T+ FG D++ Y++ +KD KKL + E+ + TN K + G+ K L+
Sbjct: 11103 TFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLK 11159
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 306 KKSYTLYLKDYMKKLVAKLEEK 371
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical
protein ZK945.3 protein.
Length = 766
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 303 DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKE 446
+KK+ L L +K + K+EEKA K+ ++K +KD L R K+
Sbjct: 22 EKKAKGLKLNKVDRKRIVKIEEKA-----ALKSKVDKAVKDELERLKK 64
>U40958-3|ABQ13075.1| 219|Caenorhabditis elegans Hypothetical
protein F09F9.5 protein.
Length = 219
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 365 FQFCY*FFHIVFEVQCVGFLVTEGVCF 285
+Q C+ F H+ +GF GVCF
Sbjct: 53 YQTCFGFMHVKIATCSIGFFALLGVCF 79
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 351 LIFSYSL*GTMCRISCHRRRMFRLACGSGLCQPALDGRVRALVS 220
++FSY L G + SC R+ R G+ LD + A+VS
Sbjct: 2939 IVFSYCLAGAVFFTSCKMIRILRFNRRIGVLAATLDNALGAIVS 2982
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 351 LIFSYSL*GTMCRISCHRRRMFRLACGSGLCQPALDGRVRALVS 220
++FSY L G + SC R+ R G+ LD + A+VS
Sbjct: 2939 IVFSYCLAGAVFFTSCKMIRILRFNRRIGVLAATLDNALGAIVS 2982
>AF067608-10|AAC17650.1| 261|Caenorhabditis elegans Hypothetical
protein B0511.3 protein.
Length = 261
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -2
Query: 547 EKHHDWYLRTIKVLYSIMATMPSQSIDSPVKN*SSLNLP 431
+K DW R+++V MA M S SI VKN S+ LP
Sbjct: 76 DKCDDWVSRSVRV----MAEMLSSSIYPDVKNISTCGLP 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,352,687
Number of Sequences: 27780
Number of extensions: 274213
Number of successful extensions: 819
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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