Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30330
         (501 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XTD9 Cluster: Putative uncharacterized protein; n=1; ...    34   2.1  
UniRef50_Q4XY64 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  

>UniRef50_Q4XTD9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 441

 Score = 33.9 bits (74), Expect = 2.1
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +3

Query: 108 SVHCNKKIVTSIARIYVYFILLNFLFAIIYF*ACVFRRKLKKREEFVKCLGVINKIQL-K 284
           S++  +K  T I     ++I ++F    IY  A +   KLKK  + +KC+  IN+ QL  
Sbjct: 366 SLYICEKYETIIEHYKYHYIYIDFYLTYIYLKALI---KLKKYNDCLKCIFDINRQQLDP 422

Query: 285 VKKCI 299
           + KCI
Sbjct: 423 LNKCI 427


>UniRef50_Q4XY64 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 47

 Score = 32.7 bits (71), Expect = 4.8
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +2

Query: 137 FYCPHICLFYFIKFFICHNLFLSLCV 214
           F+ P + + YF+ F+I  ++F+SLC+
Sbjct: 22  FFIPRLRILYFLSFYIKFSIFISLCI 47


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 422,767,668
Number of Sequences: 1657284
Number of extensions: 7115314
Number of successful extensions: 19038
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19029
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)