Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30330
         (501 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   4.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
 Frame = +2

Query: 137 FYCPHI---CLFYFIKFFICHNLFLSLCV 214
           FYC  I   C++YF   FI   + L L V
Sbjct: 228 FYCVLIILLCIYYFYYAFILFTVHLLLLV 256


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 401  GGRSWLLIVDITKSRCRHWR 460
            GG  W L +D  K+RC   R
Sbjct: 1734 GGMIWALDLDDFKNRCGEGR 1753



 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 401  GGRSWLLIVDITKSRC 448
            GG  W L +D  K+RC
Sbjct: 2657 GGMVWALDLDDFKNRC 2672


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 343 HYHFLIVLPLGLNLW*HL 396
           H HFL  + +G+NL  H+
Sbjct: 670 HCHFLFHIVIGMNLIIHV 687


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 343 HYHFLIVLPLGLNLW*HLSWWKELAP 420
           H HFL  + +G+NL   +    +L P
Sbjct: 670 HCHFLFHIVIGMNLVLQVGTHADLPP 695


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 430 VDDEEPTPSTSSGATIDLI 374
           VDD +P P  + G   DL+
Sbjct: 223 VDDCKPNPCQNGGTCHDLV 241


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,730
Number of Sequences: 336
Number of extensions: 2141
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)