Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30330
         (501 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024817-18|AAK68533.1|  342|Caenorhabditis elegans C-type lecti...    29   1.4  
Z81547-5|CAE17817.1|  112|Caenorhabditis elegans Hypothetical pr...    28   4.4  
AL021489-3|CAE18015.1|  112|Caenorhabditis elegans Hypothetical ...    28   4.4  
AF039038-7|AAM81098.1|  942|Caenorhabditis elegans Hypothetical ...    28   4.4  
U00051-14|AAM29692.1|  469|Caenorhabditis elegans Hypothetical p...    27   5.8  
U00051-13|AAA91358.1|  491|Caenorhabditis elegans Hypothetical p...    27   5.8  
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr...    27   7.6  

>AC024817-18|AAK68533.1|  342|Caenorhabditis elegans C-type lectin
           protein 81 protein.
          Length = 342

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 146 GNRSDNFFVAMYTMRDITPTTPKPCQLTCCLLYY 45
           G+   N+FV  Y    + PTT KP     CL+ Y
Sbjct: 137 GSTDKNYFVCSYDPASV-PTTAKPLSSVTCLIMY 169


>Z81547-5|CAE17817.1|  112|Caenorhabditis elegans Hypothetical
           protein F53F8.6 protein.
          Length = 112

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
 Frame = +3

Query: 96  NVAHSVHCNKKIVTSIARIYVYFILLNFLFAIIYF*ACVF-----RRKLKKREE 242
           N  H +  ++   T I+   V   +++FL  +++F  CV      RRKLK+R E
Sbjct: 29  NNMHQIVSHRVPTTRISTFLV--TIISFLLVLVFFSTCVMCITYIRRKLKRRHE 80


>AL021489-3|CAE18015.1|  112|Caenorhabditis elegans Hypothetical
           protein F53F8.6 protein.
          Length = 112

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
 Frame = +3

Query: 96  NVAHSVHCNKKIVTSIARIYVYFILLNFLFAIIYF*ACVF-----RRKLKKREE 242
           N  H +  ++   T I+   V   +++FL  +++F  CV      RRKLK+R E
Sbjct: 29  NNMHQIVSHRVPTTRISTFLV--TIISFLLVLVFFSTCVMCITYIRRKLKRRHE 80


>AF039038-7|AAM81098.1|  942|Caenorhabditis elegans Hypothetical
           protein K06A5.8b protein.
          Length = 942

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 489 RFSH*AFYYLRQ*RQRLFVMSTMRSQLLPPAQVLP 385
           RFS+ A+Y L     +  V+S MR  L+ P   LP
Sbjct: 871 RFSNAAYYLLTASYDKRVVISDMRGDLMAPLMYLP 905


>U00051-14|AAM29692.1|  469|Caenorhabditis elegans Hypothetical
           protein F42G9.1b protein.
          Length = 469

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -3

Query: 424 DEEPTPSTSSGATIDLIQGVALLENDSDDGD 332
           D E  PS+SSG     + GVA  E D DD D
Sbjct: 223 DAETAPSSSSG-----VDGVATEEEDEDDSD 248


>U00051-13|AAA91358.1|  491|Caenorhabditis elegans Hypothetical
           protein F42G9.1a protein.
          Length = 491

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -3

Query: 424 DEEPTPSTSSGATIDLIQGVALLENDSDDGD 332
           D E  PS+SSG     + GVA  E D DD D
Sbjct: 245 DAETAPSSSSG-----VDGVATEEEDEDDSD 270


>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
           protein C27H6.1 protein.
          Length = 1657

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -3

Query: 430 VDDEEPTPSTSSGATIDLIQGVALLENDSDD 338
           ++DE P P   +   ID+I+GV++  +D++D
Sbjct: 8   IEDEGP-PELPASLDIDMIEGVSMKTSDTND 37


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,097,502
Number of Sequences: 27780
Number of extensions: 186438
Number of successful extensions: 523
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)