Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30329
(634 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 22 3.7
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 21 6.5
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 6.5
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 6.5
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 6.5
AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH trans... 21 8.6
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 21 8.6
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 283 ENRRYFAQLLAQSLQNMQPQRRKNTI 206
+NR FA + S++N P RR++ +
Sbjct: 9 KNREMFAIKKSYSIENGYPARRRSLV 34
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 563 PPFSTRAAPPT*TQSPFMCHLSPWLFL 483
PP+ +PP + F+ H W++L
Sbjct: 442 PPYLFFESPPVVFLNDFISHQHAWIWL 468
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 563 PPFSTRAAPPT*TQSPFMCHLSPWLFL 483
PP+ +PP + F+ H W++L
Sbjct: 442 PPYLFFESPPVVFLNDFISHQHAWIWL 468
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 563 PPFSTRAAPPT*TQSPFMCHLSPWLFL 483
PP+ +PP + F+ H W++L
Sbjct: 442 PPYLFFESPPVVFLNDFISHQHAWIWL 468
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 563 PPFSTRAAPPT*TQSPFMCHLSPWLFL 483
PP+ +PP + F+ H W++L
Sbjct: 442 PPYLFFESPPVVFLNDFISHQHAWIWL 468
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 21.4 bits (43), Expect = 6.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 403 LIS*NVLDVIQISIEKLSFAELLGSGLF 320
LI ++ D ++ KLSF ++G G F
Sbjct: 435 LIKPDIFDQWELGPLKLSFQGVIGEGAF 462
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 196 RMWLLYSFVAGVACFVGF 249
R + +Y+FVA V C F
Sbjct: 51 RTYFIYAFVAPVKCLAFF 68
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = -3
Query: 563 PPFSTRAAPPT*TQSPFMCHLSPWLFL 483
PP+ PP F+ H W++L
Sbjct: 196 PPYLFFVPPPLMFLQDFLSHQHAWIWL 222
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 196 RMWLLYSFVAGVACFVGF 249
R + +Y+FVA V C F
Sbjct: 284 RTYFIYAFVAPVKCLAFF 301
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = -3
Query: 563 PPFSTRAAPPT*TQSPFMCHLSPWLFL 483
PP+ PP F+ H W++L
Sbjct: 429 PPYLFFVPPPLMFLQDFLSHQHAWIWL 455
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 196 RMWLLYSFVAGVACFVGF 249
R + +Y+FVA V C F
Sbjct: 284 RTYFIYAFVAPVKCLAFF 301
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = -3
Query: 563 PPFSTRAAPPT*TQSPFMCHLSPWLFL 483
PP+ PP F+ H W++L
Sbjct: 429 PPYLFFVPPPLMFLQDFLSHQHAWIWL 455
>AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH
transcription factor protein.
Length = 193
Score = 21.0 bits (42), Expect = 8.6
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = +1
Query: 502 KWHMKGDW 525
+W M+GDW
Sbjct: 180 RWRMEGDW 187
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 21.0 bits (42), Expect = 8.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 508 HMKGDWVQVGGAALVEKGGNLLRHFVQTGPADHLSNL 618
H K +V +G + L K + L VQ P+D + L
Sbjct: 5 HRKQRFVDIGDSLLTLKLTHALSSSVQNFPSDAIKIL 41
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,343
Number of Sequences: 336
Number of extensions: 3171
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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